Equivalence class DNA_4.0_21245.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2GIE|1|E+ 2GIE|1|F+ 2GIE|1|G+ 2GIE|1|H (rep) | 5'-D(*GP*CP*CP*GP*GP*TP*TP*AP*AP*CP*CP*GP*G)-3' | HincII bound to cognate DNA GTTAAC | X-ray diffraction | 2.6 | 2006-07-18 | ||||
| 2 | 1TX3|1|E+ 1TX3|1|F+ 1TX3|1|G+ 1TX3|1|H | 5'-D(*GP*CP*CP*GP*GP*TP*CP*GP*AP*CP*CP*GP*G)-3' | HINCII BOUND TO COGNATE DNA | X-ray diffraction | 2.5 | 2005-02-15 | ||||
| 3 | 1TW8|1|E+ 1TW8|1|F+ 1TW8|1|G+ 1TW8|1|H | 5'-D(*GP*CP*CP*GP*GP*TP*CP*GP*AP*CP*CP*GP*G)-3' | HincII bound to Ca2+ and cognate DNA GTCGAC | X-ray diffraction | 2.8 | 2004-08-10 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2GIE|1|E+2GIE|1|F+2GIE|1|G+2GIE|1|H | HincII bound to cognate DNA GTTAAC | X-RAY DIFFRACTION | 2.6 | 13 | enzyme,hydrolase,nuclease | |
| 2 | 1TX3|1|E+1TX3|1|F+1TX3|1|G+1TX3|1|H | HINCII BOUND TO COGNATE DNA | X-RAY DIFFRACTION | 2.5 | 13 | enzyme,hydrolase,nuclease | |
| 3 | 1TW8|1|E+1TW8|1|F+1TW8|1|G+1TW8|1|H | HincII bound to Ca2+ and cognate DNA GTCGAC | X-RAY DIFFRACTION | 2.8 | 13 | enzyme,hydrolase,nuclease |
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