Equivalence class DNA_4.0_01267.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2AYB|1|C+ 2AYB|1|D (rep) | 5'-D(*CP*AP*AP*CP*CP*GP*AP*AP*TP*TP*CP*GP*GP*TP*TP*G)-3' | Crystal structure of HPV6a E2 DNA Binding Domain bound to a 16 base pair DNA target | X-ray diffraction | 3.2 | 2006-08-22 | ||||
| 2 | 1JJ4|1|C+ 1JJ4|1|D | E2 binding site DNA | Human papillomavirus type 18 E2 DNA-binding domain bound to its DNA target | X-ray diffraction | 2.4 | 2001-07-13 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2AYB|1|C+2AYB|1|D | Crystal structure of HPV6a E2 DNA Binding Domain bound to a 16 base pair DNA target | X-RAY DIFFRACTION | 3.2 | 16 | B-form double helix,double helix,structure | regulatory,transcription |
| 2 | 1JJ4|1|C+1JJ4|1|D | Human papillomavirus type 18 E2 DNA-binding domain bound to its DNA target | X-RAY DIFFRACTION | 2.4 | 16 | B-form double helix,double helix,structure | regulatory,transcription |
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