Equivalence class DNA_3.0_37578.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2PKV|1|A+ 2PKV|1|B (rep) | 5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3' | D-(GGTATACC) ambient pressure | X-ray diffraction | 1.6 | 2007-07-24 | ||||
| 2 | 2HC7|1|A | 5'-D(*GP*(2ST)P*GP*TP*AP*CP*AP*C)-3' | 2'-selenium-T A-DNA [G(TSe)GTACAC] | X-ray diffraction | 1.4 | 2006-07-04 | ||||
| 3 | 3HG8|1|A | 5'-D(*GP*(UMS)P*GP*(US2)P*AP*CP*AP*C)-3' | Crystal Structure of 5-SMe Derivatized DNA | X-ray diffraction | 1.38 | 2009-07-21 | ||||
| 4 | 1Z7I|1|A | 5'-D(*GP*(UMS)P*GP*TP*AP*CP*AP*C)-3' | 2'-Me-Se Derivitation of A-DNA Octamer G(UMSe)GTACAC | X-ray diffraction | 1.28 | 2005-04-05 | ||||
| 5 | 1R3Z|1|A | 5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*C)-3' | Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers | X-ray diffraction | 1.7 | 2003-12-23 | ||||
| 6 | 3IFI|1|A | DNA (5'-D(*GP*TP*(XUG)P*TP*AP*CP*AP*C)-3') | 2'-SeMe-dG modified octamer DNA | X-ray diffraction | 1.2 | 2009-08-11 | ||||
| 7 | 3IKI|1|A | 5'-D(*GP*(UMS)P*GP*(US2)P*AP*CP*AP*C)-3' | 5-SMe-dU containing DNA octamer | X-ray diffraction | 1.38 | 2010-03-09 | ||||
| 8 | 3LTU|1|A | 5'-D(*GP*(UMS)P*GP*(T5S)P*AP*CP*AP*C)-3' | 5-SeMe-dU containing DNA 8mer | X-ray diffraction | 1.4 | 2010-03-09 | ||||
| 9 | 2PL4|1|A+ 2PL4|1|B | Synthetic DNA octamer | D-(GGTATACC) under 0.55 GPa hydrostatic pressure | X-ray diffraction | 1.65 | 2007-07-24 | ||||
| 10 | 3IJK|1|A | 5'-D(*GP*(UMS)P*GP*(T5O)P*AP*CP*AP*C)-3' | 5-OMe modified DNA 8mer | X-ray diffraction | 1.3 | 2009-10-06 | ||||
| 11 | 2PL8|1|A+ 2PL8|1|B | 5'-D(*DGP*DGP*DTP*DAP*DTP*DAP*DCP*DC)-3' | D(GTATACC) under hydrostatic pressure of 1.04 GPa | X-ray diffraction | 1.65 | 2007-07-24 | ||||
| 12 | 3LTR|1|A | 5'-D(*GP*(UMS)P*GP*(T5O)P*AP*CP*AP*C)-3' | 5-OMe-dU containing DNA 8mer | X-ray diffraction | 1.3 | 2010-03-09 | ||||
| 13 | 2A7E|1|S | DNA (5'-D(*CP*CP*CP*TP*AP*GP*GP*G)-3') | On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- The Optimal Data Collection Wavelength | X-ray diffraction | 1.66 | 2005-07-19 | ||||
| 14 | 2NSK|1|A | 5'-D(*GP*(UMS)P*GP*(T4S)P*AP*CP*AP*C)-3' | Doubled Modified Selenium DNA | X-ray diffraction | 1.5 | 2006-11-14 | ||||
| 15 | 1R41|1|A | 5'-D(*GP*CP*GP*CP*GP*(5CM)P*GP*(5CM))-3' | Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers | X-ray diffraction | 1.9 | 2003-12-23 | ||||
| 16 | 3HGD|1|A+ 3HGD|1|B | 5'-D(*GP*(UMS)P*GP*(US3)P*AP*CP*AP*C)-3' | Crystal Structure of 2-Se-Thymidine Derivatized DNA | X-ray diffraction | 1.57 | 2009-08-18 | ||||
| 17 | 2GPX|1|A | 5'-D(*GP*(UMS)P*GP*(BRU)P*AP*CP*AP*C)-3' | 2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC | X-ray diffraction | 1.6 | 2006-05-23 | ||||
| 18 | 3KXT|1|B+ 3KXT|1|C | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Crystal structure of Sulfolobus Cren7-dsDNA complex | X-ray diffraction | 1.602 | 2010-06-09 | ||||
| 19 | 3K18|1|A | 5'-D(*GP*(UMS)P*GP*(TTI)P*AP*CP*AP*C)-3' | Tellurium modified DNA-8mer | X-ray diffraction | 1.5 | 2010-10-06 | ||||
| 20 | 1WTO|1|B+ 1WTO|1|C | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Hyperthermophile chromosomal protein SAC7D double mutant V26F/M29F in complex with DNA GCGATCGC | X-ray diffraction | 1.5 | 2005-02-22 | ||||
| 21 | 2PLB|1|A+ 2PLB|1|B | 5'-D(*DGP*DGP*DTP*DAP*DTP*DAP*DCP*DC)-3' | D(GTATACC) under hydrostatic pressure of 1.39 GPa | X-ray diffraction | 1.6 | 2007-07-24 | ||||
| 22 | 1WTQ|1|B+ 1WTQ|1|C | 5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GTAATTAC | X-ray diffraction | 1.7 | 2005-02-22 | ||||
| 23 | 1WTV|1|B+ 1WTV|1|C | 5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC | X-ray diffraction | 1.6 | 2005-02-22 | ||||
| 24 | 2H05|1|A | 5'-D(*GP*TP*GP*(BRU)P*AP*CP*AP*C)-3' | Br Derivitation of A-DNA Octamer GTG(Ubr)ACAC | X-ray diffraction | 1.8 | 2006-05-23 | ||||
| 25 | 3BM0|1|A | 5'-D(*GP*(2'-Se-U)P*GP*(5-Se-U)P*AP*CP*AP*C)-3' | Structure of DNA Octamer G(dUSe)G(5-SedU)ACAC | X-ray diffraction | 1.8 | 2008-06-10 | ||||
| 26 | 1XYI|1|B+ 1XYI|1|C | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Hyperthermophile chromosomal protein Sac7d double mutant Val26Ala/Met29Ala in complex with DNA GCGATCGC | X-ray diffraction | 1.45 | 2005-02-08 | ||||
| 27 | 3A4K|1|F+ 3A4K|1|J+ 3A4K|1|E+ 3A4K|1|I | DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*A)-3') | Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA and divalent cations at 2.17 angstrom resolution | X-ray diffraction | 2.17 | 2009-10-20 | ||||
| 28 | 3A4K|1|H+ 3A4K|1|L+ 3A4K|1|G+ 3A4K|1|K | DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*A)-3') | Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA and divalent cations at 2.17 angstrom resolution | X-ray diffraction | 2.17 | 2009-10-20 | ||||
| 29 | 3LWH|1|B+ 3LWH|1|C | DNA (5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3') | Crystal structure of Cren7-dsDNA complex | X-ray diffraction | 1.9 | 2010-05-26 | ||||
| 30 | 2W42|1|P+ 2W42|1|Q | 5'-D(*TP*TP*CP*GP*AP*CP*GP*CP)-3', 5'-D(*GP*TP*CP*GP*AP*AP*TP*TP)-3' | Homo sapiens | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX. | X-ray diffraction | 1.9 | 2008-12-09 | |||
| 31 | 2W42|1|R+ 2W42|1|S | 5'-D(*TP*TP*CP*GP*AP*CP*GP*CP)-3', 5'-D(*GP*TP*CP*GP*AP*AP*TP*TP)-3' | Homo sapiens | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX. | X-ray diffraction | 1.9 | 2008-12-09 | |||
| 32 | 3LWI|1|C+ 3LWI|1|D | DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3') | Crystal structure of Cren7-dsDNA complex | X-ray diffraction | 2.3 | 2010-05-26 | ||||
| 33 | 3LWI|1|E+ 3LWI|1|F | DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3') | Crystal structure of Cren7-dsDNA complex | X-ray diffraction | 2.3 | 2010-05-26 | ||||
| 34 | 2FJW|1|B+ 2FJW|1|G | 5'-D(*CP*TP*TP*GP*AP*AP*TP*G)-3', 5'-D(P*CP*AP*TP*TP*CP*AP*AP*G)-3' | d(CTTGAATGCATTCAAG) in complex with MMLV RT catalytic fragment | X-ray diffraction | 1.95 | 2006-06-27 | ||||
| 35 | 3IJN|1|A | 5'-D(*GP*(UMS)P*GP*TP*AP*(5SE)P*AP*C)-3' | 5-SeMe-Cytidine modified DNA 8mer | X-ray diffraction | 1.8 | 2009-10-06 | ||||
| 36 | 1WTR|1|B+ 1WTR|1|C | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GCGATCGC | X-ray diffraction | 1.8 | 2005-02-22 | ||||
| 37 | 1WTP|1|C+ 1WTP|1|D | 5'-D(*GP*CP*GP*AP*(BRU)P*CP*GP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GCGA(UBr)CGC | X-ray diffraction | 1.9 | 2005-02-22 | ||||
| 38 | 1WTP|1|E+ 1WTP|1|F | 5'-D(*GP*CP*GP*AP*(BRU)P*CP*GP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GCGA(UBr)CGC | X-ray diffraction | 1.9 | 2005-02-22 | ||||
| 39 | 2O19|1|D | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomersae III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 5.5 | X-ray diffraction | 2.45 | 2007-04-03 | ||||
| 40 | 1VAQ|1|A+ 1VAQ|1|B | 5'-D(*TP*TP*GP*GP*CP*CP*AP*A)-3' | synthetic construct | Crystal structure of the Mg2+-(chromomycin A3)2-d(TTGGCCAA)2 complex reveals GGCC binding specificity of the drug dimer chelated by metal ion | X-ray diffraction | 2 | 2004-06-22 | |||
| 41 | 2R2T|1|B+ 2R2T|1|G | DNA (5'-D(*DAP*DTP*DTP*DTP*DAP*DGP*DTP*DT)-3'), DNA (5'-D(P*DAP*DAP*DCP*DTP*DAP*DAP*DAP*DT)-3') | d(ATTTAGTTAACTAAAT) complexed with MMLV RT catalytic fragment | X-ray diffraction | 2 | 2008-07-22 | ||||
| 42 | 1VAQ|1|C+ 1VAQ|1|D | 5'-D(*TP*TP*GP*GP*CP*CP*AP*A)-3' | synthetic construct | Crystal structure of the Mg2+-(chromomycin A3)2-d(TTGGCCAA)2 complex reveals GGCC binding specificity of the drug dimer chelated by metal ion | X-ray diffraction | 2 | 2004-06-22 | |||
| 43 | 1WTX|1|B+ 1WTX|1|C | 5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant V26A in complex with DNA GTAATTAC | X-ray diffraction | 2.2 | 2005-02-22 | ||||
| 44 | 2R2R|1|B+ 2R2R|1|G | DNA (5'-D(*DAP*DTP*DTP*DAP*DGP*DTP*DTP*DA)-3'), DNA (5'-D(P*DTP*DAP*DAP*DCP*DTP*DAP*DAP*DT)-3') | d(ATTAGTTATAACTAAT) complexed with MMLV RT catalytic fragment | X-ray diffraction | 2.1 | 2008-07-22 | ||||
| 45 | 1OUP|1|C+ 1OUP|1|D | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Crystal structure of the periplasmic endonuclease Vvn complexed with octamer double stranded DNA | X-ray diffraction | 2.3 | 2003-08-05 | ||||
| 46 | 1OUP|1|F+ 1OUP|1|E+ 1OUP|1|G | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3', 5'-D(*GP*CP*GP*AP*TP*C)-3', 5'-D(P*GP*C)-3' | Crystal structure of the periplasmic endonuclease Vvn complexed with octamer double stranded DNA | X-ray diffraction | 2.3 | 2003-08-05 | ||||
| 47 | 2O59|1|D | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol pH 8.0 | X-ray diffraction | 2.5 | 2007-04-03 | ||||
| 48 | 3IGM|1|C+ 3IGM|1|D | 5'-D(*TP*GP*CP*AP*TP*GP*CP*A)-3' | A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA | X-ray diffraction | 2.2 | 2009-11-10 | ||||
| 49 | 3IGM|1|W+ 3IGM|1|X | 5'-D(*TP*GP*CP*AP*TP*GP*CP*A)-3' | A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA | X-ray diffraction | 2.2 | 2009-11-10 | ||||
| 50 | 3ODC|1|C+ 3ODC|1|D | 5'-D(*CP*CP*CP*AP*GP*AP*CP*G)-3', 5'-D(*CP*GP*TP*CP*TP*GP*GP*G)-3' | Human PARP-1 zinc finger 2 (Zn2) bound to DNA | X-ray diffraction | 2.8 | 2011-01-12 | ||||
| 51 | 3ODC|1|E+ 3ODC|1|F | 5'-D(*CP*CP*CP*AP*GP*AP*CP*G)-3', 5'-D(*CP*GP*TP*CP*TP*GP*GP*G)-3' | Human PARP-1 zinc finger 2 (Zn2) bound to DNA | X-ray diffraction | 2.8 | 2011-01-12 | ||||
| 52 | 2R2U|1|G+ 2R2U|1|B | DNA (5'-D(P*DTP*DAP*DCP*DTP*DAP*DAP*DAP*DT)-3'), DNA (5'-D(*DAP*DTP*DTP*DTP*DAP*DGP*DT)-3') | Co(III)bleomycinB2 bithiazole/C-terminal tail domain bound to d(ATTTAGTTAACTAAAT) complexed with MMLV RT catalytic fragment | X-ray diffraction | 2.3 | 2008-07-22 | ||||
| 53 | 3KQ8|1|A | 5'-D(*GP*(UMS)P*GP*(TTI)P*AP*CP*AP*C)-3' | 5-Te-uridine derivatized DNA-8mer | X-ray diffraction | 1.6 | 2010-11-17 | ||||
| 54 | 2O54|1|D | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 7.0 | X-ray diffraction | 2.5 | 2007-04-03 | ||||
| 55 | 1WTW|1|B+ 1WTW|1|C | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant V26A in complex with DNA GCGATCGC | X-ray diffraction | 2.2 | 2005-02-22 | ||||
| 56 | 3ODE|1|C+ 3ODE|1|D | 5'-D(*CP*CP*CP*AP*AP*GP*CP*G)-3', 5'-D(*CP*GP*CP*TP*TP*GP*GP*G)-3' | Human PARP-1 zinc finger 2 (Zn2) bound to DNA | X-ray diffraction | 2.95 | 2011-01-12 | ||||
| 57 | 3ODE|1|E+ 3ODE|1|F | 5'-D(*CP*CP*CP*AP*AP*GP*CP*G)-3', 5'-D(*CP*GP*CP*TP*TP*GP*GP*G)-3' | Human PARP-1 zinc finger 2 (Zn2) bound to DNA | X-ray diffraction | 2.95 | 2011-01-12 | ||||
| 58 | 2GOT|1|B | DNA (5'-D(*DGP*(CBR)P*DGP*DAP*DAP*DCP*DGP*DC)-3') | Crystal structure of d(GCGAACGC): two types of bulge-containing duplexes | X-ray diffraction | 2.602 | 2007-04-24 | ||||
| 59 | 1PT3|1|C+ 1PT3|1|D | 5'-GCGATCGC-3' | Crystal structures of nuclease-ColE7 complexed with octamer DNA | X-ray diffraction | 2.5 | 2004-03-30 | ||||
| 60 | 1PT3|1|E+ 1PT3|1|F | 5'-GCGATCGC-3' | Crystal structures of nuclease-ColE7 complexed with octamer DNA | X-ray diffraction | 2.5 | 2004-03-30 | ||||
| 61 | 1PT3|1|G+ 1PT3|1|H | 5'-GCGATCGC-3' | Crystal structures of nuclease-ColE7 complexed with octamer DNA | X-ray diffraction | 2.5 | 2004-03-30 | ||||
| 62 | 2R2S|1|G+ 2R2S|1|B | DNA (5'-D(P*DTP*DAP*DAP*DCP*DTP*DAP*DAP*DT)-3'), DNA (5'-D(*DAP*DTP*DTP*DAP*DGP*DTP*DT)-3') | Co(III)bleomycinB2 bound to d(ATTAGTTATAACTAAT) complexed with MMLV RT catalytic fragment | X-ray diffraction | 2.8 | 2008-07-22 | ||||
| 63 | 2C5R|1|Y+ 2C5R|1|Z | 5'-D(*TP*CP*CP*AP*CP*CP*GP*GP)-3', 5'-D(*CP*CP*GP*GP*TP*GP*GP*AP)-3' | The structure of phage phi29 replication organizer protein p16.7 in complex with double stranded DNA | X-ray diffraction | 2.9 | 2005-11-08 | ||||
| 64 | 1V15|1|E+ 1V15|1|F | 5'-D(*GP*CP*GP*AP*TP*CP*GP*CP)-3' | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-ray diffraction | 2.4 | 2004-06-23 | ||||
| 65 | 1V15|1|G+ 1V15|1|H | 5'-D(*GP*CP*GP*AP*TP*CP*GP*CP)-3' | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-ray diffraction | 2.4 | 2004-06-23 | ||||
| 66 | 1V15|1|I+ 1V15|1|J | 5'-D(*GP*CP*GP*AP*TP*CP*GP*CP)-3' | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-ray diffraction | 2.4 | 2004-06-23 | ||||
| 67 | 1V15|1|K+ 1V15|1|L | 5'-D(*GP*CP*GP*AP*TP*CP*GP*CP)-3' | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-ray diffraction | 2.4 | 2004-06-23 | ||||
| 68 | 1V14|1|E+ 1V14|1|F | 5'-D(*GP*CP*GP*AP*TP*CP*GP*CP)-3' | Crystal Structure of the Colicin E9, mutant His103Ala, in complex with Mg+2 and dsDNA (resolution 2.9A) | X-ray diffraction | 2.9 | 2004-06-23 | ||||
| 69 | 1V14|1|G+ 1V14|1|H | 5'-D(*GP*CP*GP*AP*TP*CP*GP*CP)-3' | Crystal Structure of the Colicin E9, mutant His103Ala, in complex with Mg+2 and dsDNA (resolution 2.9A) | X-ray diffraction | 2.9 | 2004-06-23 | ||||
| 70 | 1V14|1|I+ 1V14|1|J | 5'-D(*GP*CP*GP*AP*TP*CP*GP*CP)-3' | Crystal Structure of the Colicin E9, mutant His103Ala, in complex with Mg+2 and dsDNA (resolution 2.9A) | X-ray diffraction | 2.9 | 2004-06-23 | ||||
| 71 | 1V14|1|K+ 1V14|1|L | 5'-D(*GP*CP*GP*AP*TP*CP*GP*CP)-3' | Crystal Structure of the Colicin E9, mutant His103Ala, in complex with Mg+2 and dsDNA (resolution 2.9A) | X-ray diffraction | 2.9 | 2004-06-23 | ||||
| 72 | 1D78|1|A | DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3') | HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION | X-ray diffraction | 1.4 | 1993-04-15 | ||||
| 73 | 2PLO|1|A+ 2PLO|1|B | 5'-D(*DGP*DGP*DTP*DAP*DTP*DAP*DCP*DC)-3' | D-(GTATACC) low temperature (100K) | X-ray diffraction | 1.4 | 2008-05-27 | ||||
| 74 | 1D79|1|A | DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3') | HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION | X-ray diffraction | 1.45 | 1993-04-15 | ||||
| 75 | 1C8C|1|B+ 1C8C|1|C | 5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3' | CRYSTAL STRUCTURES OF THE CHROMOSOMAL PROTEINS SSO7D/SAC7D BOUND TO DNA CONTAINING T-G MISMATCHED BASE PAIRS | X-ray diffraction | 1.45 | 2001-05-04 | ||||
| 76 | 344D|1|A | DNA (5'-D(*AP*CP*GP*TP*AP*CP*GP*(BRU))-3') | DETERMINATION BY MAD-DM OF THE STRUCTURE OF THE DNA DUPLEX D(ACGTACG(5-BRU))2 AT 1.46A AND 100K | X-ray diffraction | 1.46 | 1997-09-26 | ||||
| 77 | 3FA1|1|A | 5'-D(*DGP*(UMS)P*DGP*(TTI)P*DAP*DCP*DAP*DC)-3' | Crystal Structure of Tellurium Derivatized DNA | X-ray diffraction | 1.5 | 2009-01-27 | ||||
| 78 | 2DLJ|1|A | 5'-D(*GP*(UMS)P*GP*(BRU)P*AP*CP*AP*C)-3' | 2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC | X-ray diffraction | 1.5 | 2006-05-23 | ||||
| 79 | 295D|1|A | DNA (5'-D(*AP*TP*GP*CP*GP*CP*AP*T)-3') | CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY | X-ray diffraction | 1.5 | 1996-12-04 | ||||
| 80 | 1JUX|1|A | 5'-D(*IP*TP*IP*TP*AP*CP*AP*C)-3' | 1.6A Resolution Crystal Structures of the DNA Octamers d(IUATATAC) and d(ITITACAC):Binding of Two Distamycin Drugs Side-by-Side | X-ray diffraction | 1.6 | 2004-01-27 | ||||
| 81 | 340D|1|A | DNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 1.6 | 1997-07-21 | ||||
| 82 | 368D|1|A+ 368D|1|B | DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3') | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-ray diffraction | 1.6 | 1998-07-15 | ||||
| 83 | 306D|1|A | DNA (5'-D(*IP*CP*IP*TP*AP*CP*IP*C)-3') | SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICITACIC) | X-ray diffraction | 1.6 | 1997-09-22 | ||||
| 84 | 1BF4|1|B+ 1BF4|1|C | DNA (5'-D(*GP*CP*GP*TP*5IUP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*AP*AP*CP*GP*C)-3') | CHROMOSOMAL DNA-BINDING PROTEIN SSO7D/D(GCGAACGC) COMPLEX | X-ray diffraction | 1.6 | 1999-11-10 | ||||
| 85 | 1AZP|1|B+ 1AZP|1|C | DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3') | HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX | X-ray diffraction | 1.6 | 1999-01-13 | ||||
| 86 | 118D|1|A | DNA (5'-D(*GP*TP*GP*CP*GP*CP*AP*C)-3') | CRYSTAL AND MOLECULAR STRUCTURE OF D(GTGCGCAC): INVESTIGATION OF THE EFFECTS OF BASE SEQUENCE ON THE CONFORMATION OF OCTAMER DUPLEXES | X-ray diffraction | 1.64 | 1993-02-11 | ||||
| 87 | 370D|1|A+ 370D|1|B | DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3') | synthetic construct | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-ray diffraction | 1.67 | 1998-07-15 | |||
| 88 | 115D|1|A+ 115D|1|B | DNA (5'-D(*GP*GP*(BRU)P*AP*(BRU)P*AP*CP*C)-3') | ORDERED WATER STRUCTURE IN AN A-DNA OCTAMER AT 1.7 ANGSTROMS RESOLUTION | X-ray diffraction | 1.7 | 1993-07-15 | ||||
| 89 | 2D94|1|A | DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*C)-3') | THE CONFORMATION OF THE DNA DOUBLE HELIX IN THE CRYSTAL IS DEPENDENT ON ITS ENVIRONMENT | X-ray diffraction | 1.7 | 1994-01-15 | ||||
| 90 | 1D90|1|A+ 1D90|1|B | DNA (5'-D(*GP*GP*IP*GP*CP*TP*CP*C)-3') | REFINED CRYSTAL STRUCTURE OF AN OCTANUCLEOTIDE DUPLEX WITH I.T MISMATCHED BASE PAIRS | X-ray diffraction | 1.7 | 1993-07-15 | ||||
| 91 | 341D|1|A | DNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 1.75 | 1997-07-21 | ||||
| 92 | 3FSI|1|B+ 3FSI|1|G | 5'-D(P*GP*AP*AP*TP*TP*AP*AP*G)-3', 5'-D(*CP*TP*TP*AP*AP*TP*TP*C)-3' | Crystal structure of a trypanocidal 4,4'-Bis(imidazolinylamino)diphenylamine bound to DNA | X-ray diffraction | 1.75 | 2009-05-19 | ||||
| 93 | 9DNA|1|A | DNA (5'-D(*GP*CP*CP*CP*GP*GP*GP*C)-3') | CRYSTAL STRUCTURE ANALYSIS OF AN A-DNA FRAGMENT AT 1.8 ANGSTROMS RESOLUTION. D(GCCCGGGC) | X-ray diffraction | 1.8 | 1988-01-16 | ||||
| 94 | 1VJ4|1|A+ 1VJ4|1|B | 5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3' | SEQUENCE-DEPENDENT CONFORMATION OF AN A-DNA DOUBLE HELIX: THE CRYSTAL STRUCTURE OF THE OCTAMER D(G-G-T-A-T-A-C-C) | X-ray diffraction | 1.8 | 1989-01-11 | ||||
| 95 | 159D|1|A | DNA (5'-D(*IP*CP*IP*CP*IP*CP*IP*C)-3') | SIDE BY SIDE BINDING OF TWO DISTAMYCIN A DRUGS IN THE MINOR GROOVE OF AN ALTERNATING B-DNA DUPLEX | X-ray diffraction | 1.8 | 1995-02-07 | ||||
| 96 | 1ZTW|1|B+ 1ZTW|1|G | CTTAATTC, GAATTAAG | d(CTTAATTCGAATTAAG) complexed with Moloney Murine Leukemia Virus Reverse Transcriptase catalytic fragment | X-ray diffraction | 1.8 | 2005-08-30 | ||||
| 97 | 2FJX|1|B+ 2FJX|1|G | 5'-D(*CP*TP*TP*GP*AP*AP*TP*G)-3', 5'-D(P*CP*AP*TP*TP*CP*AP*AP*G)-3' | RT29 bound to D(CTTGAATGCATTCAAG) in complex with MMLV RT catalytic fragment | X-ray diffraction | 1.8 | 2006-06-27 | ||||
| 98 | 345D|1|A | DNA (5'-D(*GP*(5CM)P*GP*CP*GP*CP*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 1.85 | 1997-08-29 | ||||
| 99 | 338D|1|A | DNA (5'-D(*GP*(5CM)P*GP*CP*GP*CP*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 1.85 | 1997-07-21 | ||||
| 100 | 337D|1|A | DNA (5'-D(*GP*CP*GP*(5CM)P*GP*(5CM)P*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 1.85 | 1997-07-21 | ||||
| 101 | 1ZTT|1|B+ 1ZTT|1|G | 5'-D(*CP*TP*TP*AP*AP*TP*TP*C)-3', 5'-D(P*GP*AP*AP*TP*TP*AP*AP*G)-3' | Netropsin bound to d(CTTAATTCGAATTAAG) in complex with MMLV RT catalytic fragment | X-ray diffraction | 1.85 | 2005-08-30 | ||||
| 102 | 371D|1|A+ 371D|1|B | DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3') | synthetic construct | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-ray diffraction | 1.9 | 1998-07-15 | |||
| 103 | 243D|1|A | DNA (5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3') | STRUCTURE OF THE DNA OCTANUCLEOTIDE D(ACGTACGT)2 | X-ray diffraction | 1.9 | 1996-02-26 | ||||
| 104 | 317D|1|A | DNA (5'-D(*CP*CP*CP*TP*AP*GP*GP*G)-3') | STRUCTURE OF D(CCTAGGG): COMPARISON WITH NINE ISOMORPHOUS OCTAMER SEQUENCES REVEALS FOUR DISTINCT PATTERNS OF SEQUENCE-DEPENDENT INTERMOLECULAR INTERACTIONS | X-ray diffraction | 1.9 | 1997-05-22 | ||||
| 105 | 304D|1|A | DNA (5'-D(*IP*CP*AP*TP*AP*TP*IP*C)-3') | SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICATATIC) IN THE MONOCLINIC FORM | X-ray diffraction | 1.9 | 1997-09-25 | ||||
| 106 | 369D|1|A+ 369D|1|B | DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3') | synthetic construct | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-ray diffraction | 1.9 | 1998-07-15 | |||
| 107 | 1ESG|1|C+ 1ESG|1|D | DNA (5'-D(*TP*GP*GP*AP*TP*TP*CP*A)-3'), DNA (5'-D(*TP*GP*AP*AP*TP*CP*CP*A)-3') | RESTRICTION ENDONUCLEASE BAMHI BOUND TO A NON-SPECIFIC DNA. | X-ray diffraction | 1.9 | 2000-05-31 | ||||
| 108 | 1AZQ|1|B+ 1AZQ|1|C | DNA (5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3') | HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX | X-ray diffraction | 1.94 | 1999-01-13 | ||||
| 109 | 1DNS|1|A | DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3') | BASE ONLY BINDING OF SPERMINE IN THE DEEP GROOVE OF THE A-DNA OCTAMER D(GTGTACAC) | X-ray diffraction | 2 | 1990-04-15 | ||||
| 110 | 2D95|1|A | DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*C)-3') | LOW-TEMPERATURE STUDY OF THE A-DNA FRAGMENT D(GGGCGCCC) | X-ray diffraction | 2 | 1994-01-15 | ||||
| 111 | 1BNZ|1|B+ 1BNZ|1|C | 5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3' | SSO7D HYPERTHERMOPHILE PROTEIN/DNA COMPLEX | X-ray diffraction | 2 | 1998-11-11 | ||||
| 112 | 2DNJ|1|B+ 2DNJ|1|C | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3', 5'-D(*GP*CP*GP*AP*TP*C)-3' | DNASE I-INDUCED DNA CONFORMATION. 2 ANGSTROMS STRUCTURE OF A DNASE I-OCTAMER COMPLEX | X-ray diffraction | 2 | 1994-01-31 | ||||
| 113 | 1I7D|1|B | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | NONCOVALENT COMPLEX OF E.COLI DNA TOPOISOMERASE III WITH AN 8-BASE SINGLE-STRANDED DNA OLIGONUCLEOTIDE | X-ray diffraction | 2.05 | 2001-06-29 | ||||
| 114 | 2FJV|1|B+ 2FJV|1|G | 5'-D(*CP*TP*TP*AP*AP*TP*TP*C)-3', 5'-D(P*GP*AP*AP*TP*TP*AP*AP*G)-3' | RT29 Bound to D(CTTAATTCGAATTAAG) in complex with MMLV RT Catalytic Fragment | X-ray diffraction | 2.05 | 2006-06-27 | ||||
| 115 | 189D|1|A | DNA (5'-D(*GP*GP*CP*CP*GP*GP*CP*C)-3') | HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION | X-ray diffraction | 2.1 | 1995-02-07 | ||||
| 116 | 346D|1|A | DNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*(5CM)P*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 2.1 | 1997-08-29 | ||||
| 117 | 342D|1|A | DNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*(5CM)P*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 2.1 | 1997-07-21 | ||||
| 118 | 1D91|1|A+ 1D91|1|B | DNA (5'-D(*GP*GP*GP*GP*TP*CP*CP*C)-3') | G.T BASE PAIRS IN A DNA HELIX. THE CRYSTAL STRUCTURE OF D(G-G-G-G-T-C-C-C) | X-ray diffraction | 2.1 | 1993-07-15 | ||||
| 119 | 1D26|1|A | DNA (5'-D(*GP*CP*CP*CP*(G31)P*GP*GP*C)-3') | EFFECT OF A SINGLE 3'-METHYLENE PHOSPHONATE LINKAGE ON THE CONFORMATION OF AN A-DNA OCTAMER DOUBLE HELIX | X-ray diffraction | 2.12 | 1992-04-07 | ||||
| 120 | 1D93|1|A | DNA (5'-D(*CP*TP*CP*TP*AP*GP*AP*G)-3') | STRUCTURAL VARIATION IN D(CTCTAGAG). IMPLICATIONS FOR PROTEIN-DNA INTERACTIONS | X-ray diffraction | 2.15 | 1993-07-15 | ||||
| 121 | 305D|1|A | DNA (5'-D(*IP*CP*AP*TP*AP*TP*IP*C)-3') | SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICATATIC) IN THE TETRAGONAL FORM | X-ray diffraction | 2.17 | 1997-09-22 | ||||
| 122 | 197D|1|A+ 197D|1|B | DNA (5'-D(*GP*TP*AP*CP*GP*TP*AP*C)-3') | ORTHORHOMBIC CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GTACGTAC). COMPARISON WITH THE TETRAGONAL STRUCTURE | X-ray diffraction | 2.19 | 1995-02-07 | ||||
| 123 | 188D|1|A | DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*C)-3') | HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION | X-ray diffraction | 2.2 | 1995-02-07 | ||||
| 124 | 339D|1|A | DNA (5'-D(*GP*(5CM)P*GP*CP*GP*(5CM)P*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 2.2 | 1997-07-21 | ||||
| 125 | 1CA6|1|B+ 1CA6|1|C | 5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3' | synthetic construct | INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA | X-ray diffraction | 2.2 | 2000-02-23 | |||
| 126 | 1CA5|1|B+ 1CA5|1|C | 5'-D(*GP*TP*GP*AP*TP*CP*AP*C)-3' | synthetic construct | INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA | X-ray diffraction | 2.2 | 2000-02-23 | |||
| 127 | 1D7Z|1|A | 5'-H(*(6HG)P*(6HT)P*(6HG)P*(6HT)P*(6HA)P*(6HC)P*(6HA)P*(6HC))-3' | CRYSTAL STRUCTURE OF A HEXITOL NUCLEIC ACID (HNA) DUPLEX AT 2.2 A RESOLUTION | X-ray diffraction | 2.21 | 2002-06-28 | ||||
| 128 | 187D|1|A | DNA (5'-D(*CP*CP*CP*CP*GP*GP*GP*G)-3') | HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION | X-ray diffraction | 2.25 | 1995-02-07 | ||||
| 129 | 5ANA|1|A | DNA (5'-D(*GP*TP*AP*CP*GP*TP*AP*C)-3') | THE CRYSTAL STRUCTURE OF D(GTACGTAC) AT 2.25 ANGSTROMS RESOLUTION. ARE THE A-DNA'S ALWAYS UNWOUND APPROXIMATELY 10 DEGREES AT THE C-G STEPS | X-ray diffraction | 2.25 | 1990-04-15 | ||||
| 130 | 1D92|1|A+ 1D92|1|B | DNA (5'-D(*GP*GP*GP*GP*CP*TP*CP*C)-3') | REFINED CRYSTAL STRUCTURE OF AN OCTANUCLEOTIDE DUPLEX WITH G.T MISMATCHED BASE-PAIRS | X-ray diffraction | 2.25 | 1993-07-15 | ||||
| 131 | 1DNK|1|C+ 1DNK|1|B | DNA (5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*AP*TP*AP*C)-3') | THE X-RAY STRUCTURE OF THE DNASE I-D(GGTATACC)2 COMPLEX AT 2.3 ANGSTROMS RESOLUTION | X-ray diffraction | 2.3 | 1994-01-31 | ||||
| 132 | 1QAI|1|C+ 1QAI|1|D | DNA (5'-D(*CP*AP*TP*GP*CP*AP*TP*G)-3') | CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN | X-ray diffraction | 2.3 | 2000-03-20 | ||||
| 133 | 1QAJ|1|C+ 1QAJ|1|D | DNA (5'-D(*CP*AP*TP*GP*CP*AP*TP*G)-3') | CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN | X-ray diffraction | 2.3 | 2000-04-02 | ||||
| 134 | 281D|1|A+ 281D|1|B | DNA (5'-D(*GP*GP*CP*AP*TP*GP*CP*C)-3') | CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GGCATGCC) | X-ray diffraction | 2.38 | 1996-09-16 | ||||
| 135 | 378D|1|A+ 378D|1|B | DNA (5'-D(*GP*TP*AP*TP*AP*TP*AP*C)-3') | STRUCTURE OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN TO DNA | X-ray diffraction | 2.4 | 1999-03-04 | ||||
| 136 | 28DN|1|A | DNA (5'-D(*GP*TP*AP*CP*GP*TP*AP*C)-3') | CRYSTAL STRUCTURE ANALYSIS OF AN A(DNA) OCTAMER D(GTACGTAC) | X-ray diffraction | 2.4 | 1991-07-15 | ||||
| 137 | 378D|1|C+ 378D|1|D | DNA (5'-D(*GP*TP*AP*TP*AP*TP*AP*C)-3') | STRUCTURE OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN TO DNA | X-ray diffraction | 2.4 | 1999-03-04 | ||||
| 138 | 250D|1|A+ 250D|1|B | DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3') | STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES | X-ray diffraction | 2.47 | 1996-04-19 | ||||
| 139 | 250D|1|C+ 250D|1|D | DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3') | STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES | X-ray diffraction | 2.47 | 1996-04-19 | ||||
| 140 | 250D|1|E+ 250D|1|F | DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3') | STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES | X-ray diffraction | 2.47 | 1996-04-19 | ||||
| 141 | 3ANA|1|A+ 3ANA|1|B | DNA (5'-D(*GP*GP*GP*AP*TP*CP*CP*C)-3') | THREE-DIMENSIONAL STRUCTURE OF D(GGGATCCC) IN THE CRYSTALLINE STATE | X-ray diffraction | 2.5 | 1989-01-09 | ||||
| 142 | 2ANA|1|A+ 2ANA|1|B | DNA (5'-D(*GP*GP*GP*GP*CP*CP*CP*C)-3') | THE CRYSTAL STRUCTURE OF D(G-G-G-G-C-C-C-C). A MODEL FOR POLY(DG).POLY(DC) | X-ray diffraction | 2.5 | 1985-08-05 | ||||
| 143 | 1D82|1|A | DNA (5'-D(*GP*TP*CP*TP*AP*GP*AP*C)-3') | CRYSTAL AND MOLECULAR STRUCTURE OF D(GTCTAGAC) | X-ray diffraction | 2.5 | 1992-10-15 | ||||
| 144 | 1QPS|1|N | 5'-D(*AP*AP*TP*TP*CP*GP*CP*GP*)-3' | THE CRYSTAL STRUCTURE OF A POST-REACTIVE COGNATE DNA-ECO RI COMPLEX AT 2.50 A IN THE PRESENCE OF MN2+ ION | X-ray diffraction | 2.5 | 1999-06-14 | ||||
| 145 | 372D|1|A | DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3') | synthetic construct | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-ray diffraction | 2.6 | 1998-07-15 | |||
| 146 | 8ICK|1|P+ 8ICK|1|T | DNA (5'-D(*TP*CP*TP*AP*AP*TP*GP*A)-3'), DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR), MGCL2 (5 MILLIMOLAR), AND MNCL2 (5 MILLIMOLAR) | X-ray diffraction | 2.7 | 1996-11-15 | ||||
| 147 | 9ICV|1|P+ 9ICV|1|T | DNA (5'-D(*TP*CP*TP*AP*AP*TP*GP*A)-3'), DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3') | DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND ZNCL2 | X-ray diffraction | 2.7 | 1996-11-15 | ||||
| 148 | 1ZQI|1|T+ 1ZQI|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (150 MILLIMOLAR) | X-ray diffraction | 2.7 | 1996-11-15 | ||||
| 149 | 8ICO|1|T+ 8ICO|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF AZT-TP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-ray diffraction | 2.7 | 1996-11-15 | ||||
| 150 | 8ICN|1|P+ 8ICN|1|T | DNA (5'-D(*TP*CP*TP*AP*AP*TP*GP*A)-3'), DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF ATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-ray diffraction | 2.8 | 1996-11-15 | ||||
| 151 | 1ZQP|1|T+ 1ZQP|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (75 MILLIMOLAR) AND NACL (75 MILLIMOLAR) | X-ray diffraction | 2.8 | 1996-11-15 | ||||
| 152 | 8ICI|1|T+ 8ICI|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND MGCL2 (5 MILLIMOLAR) | X-ray diffraction | 2.8 | 1996-11-15 | ||||
| 153 | 8ICC|1|T+ 8ICC|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA (NO 5'-PHOSPHATE) | X-ray diffraction | 2.8 | 1996-11-15 | ||||
| 154 | 8ICR|1|P+ 8ICR|1|T | DNA (5'-D(*TP*CP*TP*AP*AP*TP*GP*A)-3'), DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-ray diffraction | 2.9 | 1996-11-15 | ||||
| 155 | 8ICP|1|P+ 8ICP|1|T | DNA (5'-D(*TP*CP*TP*AP*AP*TP*GP*A)-3'), DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-ray diffraction | 2.9 | 1996-11-15 | ||||
| 156 | 1ZQF|1|T+ 1ZQF|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CSCL (150 MILLIMOLAR) | X-ray diffraction | 2.9 | 1996-11-15 | ||||
| 157 | 8ICM|1|T+ 8ICM|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR), MNCL2 (5 MILLIMOLAR), AND AMMONIUM SULFATE (75 MILLIMOLAR) | X-ray diffraction | 2.9 | 1996-11-15 | ||||
| 158 | 8ICF|1|T+ 8ICF|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (10 MILLIMOLAR) AND MGCL2 (50 MILLIMOLAR) | X-ray diffraction | 2.9 | 1996-11-15 | ||||
| 159 | 9ICH|1|T+ 9ICH|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND ZNCL2 (1 MILLIMOLAR) | X-ray diffraction | 2.9 | 1996-11-15 | ||||
| 160 | 2BPF|1|T+ 2BPF|1|P | DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*CP*GP*CP*C)-3') | STRUCTURES OF TERNARY COMPLEXES OF RAT DNA POLYMERASE BETA, A DNA TEMPLATE-PRIMER, AND DDCTP | X-ray diffraction | 2.9 | 1994-12-14 | ||||
| 161 | 8ICS|1|T+ 8ICS|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-ray diffraction | 2.9 | 1996-11-15 | ||||
| 162 | 316D|1|A+ 316D|1|B | DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') | Selectivity of F8-actinomycin D for RNA:DNA hybrids and its anti-leukemia activity | X-ray diffraction | 3 | 1997-11-05 | ||||
| 163 | 209D|1|A+ 209D|1|B | DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') | Structural, physical and biological characteristics of RNA:DNA binding agent N8-actinomycin D | X-ray diffraction | 3 | 1995-10-15 | ||||
| 164 | 172D|1|A+ 172D|1|B | DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') | MULTIPLE BINDING MODES OF ANTICANCER DRUG ACTINOMYCIN D: X-RAY, MOLECULAR MODELING, AND SPECTROSCOPIC STUDIES OF D(GAAGCTTC)2-ACTINOMYCIN D COMPLEXES AND ITS HOST DNA | X-ray diffraction | 3 | 1994-10-15 | ||||
| 165 | 173D|1|B | DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') | MULTIPLE BINDING MODES OF ANTICANCER DRUG ACTINOMYCIN D: X-RAY, MOLECULAR MODELING, AND SPECTROSCOPIC STUDIES OF D(GAAGCTTC)2-ACTINOMYCIN D COMPLEXES AND ITS HOST DNA | X-ray diffraction | 3 | 1994-10-15 | ||||
| 166 | 172D|1|C+ 172D|1|D | DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') | MULTIPLE BINDING MODES OF ANTICANCER DRUG ACTINOMYCIN D: X-RAY, MOLECULAR MODELING, AND SPECTROSCOPIC STUDIES OF D(GAAGCTTC)2-ACTINOMYCIN D COMPLEXES AND ITS HOST DNA | X-ray diffraction | 3 | 1994-10-15 | ||||
| 167 | 2RVE|1|C+ 2RVE|1|D | DNA (5'-D(*CP*GP*AP*GP*CP*TP*CP*G)-3') | THE CRYSTAL STRUCTURE OF ECORV ENDONUCLEASE AND OF ITS COMPLEXES WITH COGNATE AND NON-COGNATE DNA SEGMENTS | X-ray diffraction | 3 | 1992-01-15 | ||||
| 168 | 2RVE|1|E+ 2RVE|1|F | DNA (5'-D(*CP*GP*AP*GP*CP*TP*CP*G)-3') | THE CRYSTAL STRUCTURE OF ECORV ENDONUCLEASE AND OF ITS COMPLEXES WITH COGNATE AND NON-COGNATE DNA SEGMENTS | X-ray diffraction | 3 | 1992-01-15 | ||||
| 169 | 1TAU|1|P+ 1TAU|1|T | DNA (5'-D(*CP*GP*GP*AP*TP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*AP*TP*CP*CP*G)-3') | TAQ POLYMERASE (E.C.2.7.7.7)/DNA/B-OCTYLGLUCOSIDE COMPLEX | X-ray diffraction | 3 | 1997-04-18 | ||||
| 170 | 8ICU|1|P+ 8ICU|1|T | DNA (5'-D(*TP*CP*TP*AP*AP*TP*GP*A)-3'), DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DDATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-ray diffraction | 3 | 1996-11-15 | ||||
| 171 | 9ICF|1|P+ 9ICF|1|T | DNA (5'-D(*TP*CP*TP*AP*AP*TP*GP*A)-3'), DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3') | DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND ZNCL2 | X-ray diffraction | 3 | 1995-12-15 | ||||
| 172 | 3ORC|1|R+ 3ORC|1|S | DNA (5'-D(*TP*AP*TP*CP*GP*AP*TP*A)-3') | CRYSTAL STRUCTURE OF AN ENGINEERED CRO MONOMER BOUND NONSPECIFICALLY TO DNA | X-ray diffraction | 3 | 1998-12-02 | ||||
| 173 | 9ICG|1|T+ 9ICG|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND ZNCL2 (1 MILLIMOLAR) | X-ray diffraction | 3 | 1996-11-15 | ||||
| 174 | 9ICA|1|T+ 9ICA|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-O-(1-THIOTRIPHOSPHATE), SOAKED IN THE PRESENCE OF DATP(ALPHA)S AND MNCL2 | X-ray diffraction | 3 | 1995-12-15 | ||||
| 175 | 8ICQ|1|T+ 8ICQ|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF OF DATP (0.1 MILLIMOLAR) AND MNCL2 (0.5 MILLIMOLAR) | X-ray diffraction | 3 | 1996-11-15 | ||||
| 176 | 1ZQN|1|T+ 1ZQN|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF BACL2 (15 MILLIMOLAR) AND NACL (15 MILLIMOLAR) | X-ray diffraction | 3 | 1996-11-15 | ||||
| 177 | 8ICX|1|T+ 8ICX|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-ray diffraction | 3 | 1996-11-15 | ||||
| 178 | 8ICA|1|T+ 8ICA|1|P | DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND CACL2 (5 MILLIMOLAR) | X-ray diffraction | 3 | 1996-11-15 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2O19|1|D | Structure of E. coli topoisomersae III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 5.5 | X-RAY DIFFRACTION | 2.45 | 8 | enzyme,isomerase | |
| 2 | 2O54|1|D | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 7.0 | X-RAY DIFFRACTION | 2.5 | 8 | enzyme,isomerase | |
| 3 | 2O59|1|D | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol pH 8.0 | X-RAY DIFFRACTION | 2.5 | 8 | enzyme,isomerase | |
| 4 | 1I7D|1|B | NONCOVALENT COMPLEX OF E.COLI DNA TOPOISOMERASE III WITH AN 8-BASE SINGLE-STRANDED DNA OLIGONUCLEOTIDE | X-RAY DIFFRACTION | 2.05 | 8 | enzyme,isomerase | |
| 5 | 1V14|1|G+1V14|1|H | Crystal Structure of the Colicin E9, mutant His103Ala, in complex with Mg+2 and dsDNA (resolution 2.9A) | X-RAY DIFFRACTION | 2.9 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 6 | 1V15|1|G+1V15|1|H | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-RAY DIFFRACTION | 2.4 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 7 | 1V15|1|I+1V15|1|J | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-RAY DIFFRACTION | 2.4 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 8 | 1V15|1|K+1V15|1|L | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-RAY DIFFRACTION | 2.4 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 9 | 1V14|1|K+1V14|1|L | Crystal Structure of the Colicin E9, mutant His103Ala, in complex with Mg+2 and dsDNA (resolution 2.9A) | X-RAY DIFFRACTION | 2.9 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 10 | 1V15|1|E+1V15|1|F | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-RAY DIFFRACTION | 2.4 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 11 | 1V14|1|I+1V14|1|J | Crystal Structure of the Colicin E9, mutant His103Ala, in complex with Mg+2 and dsDNA (resolution 2.9A) | X-RAY DIFFRACTION | 2.9 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 12 | 1V14|1|E+1V14|1|F | Crystal Structure of the Colicin E9, mutant His103Ala, in complex with Mg+2 and dsDNA (resolution 2.9A) | X-RAY DIFFRACTION | 2.9 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 13 | 1D90|1|A+1D90|1|B | REFINED CRYSTAL STRUCTURE OF AN OCTANUCLEOTIDE DUPLEX WITH I.T MISMATCHED BASE PAIRS | X-RAY DIFFRACTION | 1.7 | 8 | double helix,structure | |
| 14 | 3LWI|1|E+3LWI|1|F | Crystal structure of Cren7-dsDNA complex | X-RAY DIFFRACTION | 2.3 | 8 | B-form double helix,double helix,structure | chromatin,structural |
| 15 | 3LWI|1|C+3LWI|1|D | Crystal structure of Cren7-dsDNA complex | X-RAY DIFFRACTION | 2.3 | 8 | B-form double helix,double helix,structure | chromatin,structural |
| 16 | 3LWH|1|B+3LWH|1|C | Crystal structure of Cren7-dsDNA complex | X-RAY DIFFRACTION | 1.9 | 8 | B-form double helix,double helix,structure | chromatin,structural |
| 17 | 3KXT|1|B+3KXT|1|C | Crystal structure of Sulfolobus Cren7-dsDNA complex | X-RAY DIFFRACTION | 1.602 | 8 | B-form double helix,double helix,structure | chromatin,structural |
| 18 | 1AZQ|1|B+1AZQ|1|C | HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX | X-RAY DIFFRACTION | 1.94 | 8 | B-form double helix,double helix,structure | chromatin,nucleosome,structural |
| 19 | 1WTX|1|B+1WTX|1|C | Hyperthermophile chromosomal protein SAC7D single mutant V26A in complex with DNA GTAATTAC | X-RAY DIFFRACTION | 2.2 | 8 | B-form double helix,double helix,structure | chromatin,nucleosome,structural |
| 20 | 1WTQ|1|B+1WTQ|1|C | Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GTAATTAC | X-RAY DIFFRACTION | 1.7 | 8 | B-form double helix,double helix,structure | chromatin,nucleosome,structural |
| 21 | 1WTV|1|B+1WTV|1|C | Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC | X-RAY DIFFRACTION | 1.6 | 8 | B-form double helix,double helix,structure | chromatin,nucleosome,structural |
| 22 | 1BNZ|1|B+1BNZ|1|C | SSO7D HYPERTHERMOPHILE PROTEIN/DNA COMPLEX | X-RAY DIFFRACTION | 2 | 8 | B-form double helix,double helix,structure | chromatin,nucleosome,structural |
| 23 | 1XYI|1|B+1XYI|1|C | Hyperthermophile chromosomal protein Sac7d double mutant Val26Ala/Met29Ala in complex with DNA GCGATCGC | X-RAY DIFFRACTION | 1.45 | 8 | B-form double helix,double helix,structure | chromatin,nucleosome,structural |
| 24 | 1WTP|1|E+1WTP|1|F | Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GCGA(UBr)CGC | X-RAY DIFFRACTION | 1.9 | 8 | chromatin,nucleosome,structural | |
| 25 | 1WTO|1|B+1WTO|1|C | Hyperthermophile chromosomal protein SAC7D double mutant V26F/M29F in complex with DNA GCGATCGC | X-RAY DIFFRACTION | 1.5 | 8 | B-form double helix,double helix,structure | chromatin,nucleosome,structural |
| 26 | 1CA6|1|B+1CA6|1|C | INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA | X-RAY DIFFRACTION | 2.2 | 8 | double helix,feature,mispair,structure | chromatin,nucleosome,structural |
| 27 | 1C8C|1|B+1C8C|1|C | CRYSTAL STRUCTURES OF THE CHROMOSOMAL PROTEINS SSO7D/SAC7D BOUND TO DNA CONTAINING T-G MISMATCHED BASE PAIRS | X-RAY DIFFRACTION | 1.45 | 8 | double helix,feature,mispair,structure | chromatin,nucleosome,structural |
| 28 | 1BF4|1|B+1BF4|1|C | CHROMOSOMAL DNA-BINDING PROTEIN SSO7D/D(GCGAACGC) COMPLEX | X-RAY DIFFRACTION | 1.6 | 8 | B-form double helix,double helix,structure | chromatin,nucleosome,structural |
| 29 | 1WTP|1|C+1WTP|1|D | Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GCGA(UBr)CGC | X-RAY DIFFRACTION | 1.9 | 8 | chromatin,nucleosome,structural | |
| 30 | 1AZP|1|B+1AZP|1|C | HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX | X-RAY DIFFRACTION | 1.6 | 8 | B-form double helix,double helix,structure | chromatin,nucleosome,structural |
| 31 | 1WTR|1|B+1WTR|1|C | Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GCGATCGC | X-RAY DIFFRACTION | 1.8 | 8 | B-form double helix,double helix,structure | chromatin,nucleosome,structural |
| 32 | 1CA5|1|B+1CA5|1|C | INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA | X-RAY DIFFRACTION | 2.2 | 8 | B-form double helix,double helix,structure | chromatin,nucleosome,structural |
| 33 | 1WTW|1|B+1WTW|1|C | Hyperthermophile chromosomal protein SAC7D single mutant V26A in complex with DNA GCGATCGC | X-RAY DIFFRACTION | 2.2 | 8 | B-form double helix,double helix,structure | chromatin,nucleosome,structural |
| 34 | 1D7Z|1|A | CRYSTAL STRUCTURE OF A HEXITOL NUCLEIC ACID (HNA) DUPLEX AT 2.2 A RESOLUTION | X-RAY DIFFRACTION | 2.21 | 8 | double helix,structure | |
| 35 | 368D|1|A+368D|1|B | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-RAY DIFFRACTION | 1.6 | 8 | double helix,structure | |
| 36 | 197D|1|A+197D|1|B | ORTHORHOMBIC CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GTACGTAC). COMPARISON WITH THE TETRAGONAL STRUCTURE | X-RAY DIFFRACTION | 2.19 | 8 | double helix,structure | |
| 37 | 370D|1|A+370D|1|B | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-RAY DIFFRACTION | 1.67 | 8 | A-form double helix,double helix,structure | |
| 38 | 369D|1|A+369D|1|B | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-RAY DIFFRACTION | 1.9 | 8 | A-form double helix,double helix,structure | |
| 39 | 371D|1|A+371D|1|B | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-RAY DIFFRACTION | 1.9 | 8 | A-form double helix,double helix,structure | |
| 40 | 3HGD|1|A+3HGD|1|B | Crystal Structure of 2-Se-Thymidine Derivatized DNA | X-RAY DIFFRACTION | 1.57 | 8 | A-form double helix,double helix,structure | |
| 41 | 1D78|1|A | HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION | X-RAY DIFFRACTION | 1.4 | 8 | A-form double helix,double helix,structure | |
| 42 | 1D79|1|A | HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION | X-RAY DIFFRACTION | 1.45 | 8 | A-form double helix,double helix,structure | |
| 43 | 2PLB|1|A+2PLB|1|B | D(GTATACC) under hydrostatic pressure of 1.39 GPa | X-RAY DIFFRACTION | 1.6 | 8 | A-form double helix,double helix,structure | |
| 44 | 2PL8|1|A+2PL8|1|B | D(GTATACC) under hydrostatic pressure of 1.04 GPa | X-RAY DIFFRACTION | 1.65 | 8 | A-form double helix,double helix,structure | |
| 45 | 2PL4|1|A+2PL4|1|B | D-(GGTATACC) under 0.55 GPa hydrostatic pressure | X-RAY DIFFRACTION | 1.65 | 8 | A-form double helix,double helix,structure | |
| 46 | 372D|1|A | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-RAY DIFFRACTION | 2.6 | 8 | A-form double helix,double helix,structure | |
| 47 | 2A7E|1|S | On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- The Optimal Data Collection Wavelength | X-RAY DIFFRACTION | 1.66 | 8 | double helix,structure | |
| 48 | 317D|1|A | STRUCTURE OF D(CCTAGGG): COMPARISON WITH NINE ISOMORPHOUS OCTAMER SEQUENCES REVEALS FOUR DISTINCT PATTERNS OF SEQUENCE-DEPENDENT INTERMOLECULAR INTERACTIONS | X-RAY DIFFRACTION | 1.9 | 8 | A-form double helix,double helix,structure | |
| 49 | 2PLO|1|A+2PLO|1|B | D-(GTATACC) low temperature (100K) | X-RAY DIFFRACTION | 1.4 | 8 | A-form double helix,double helix,structure | |
| 50 | 1VJ4|1|A+1VJ4|1|B | SEQUENCE-DEPENDENT CONFORMATION OF AN A-DNA DOUBLE HELIX: THE CRYSTAL STRUCTURE OF THE OCTAMER D(G-G-T-A-T-A-C-C) | X-RAY DIFFRACTION | 1.8 | 8 | A-form double helix,double helix,structure | |
| 51 | 115D|1|A+115D|1|B | ORDERED WATER STRUCTURE IN AN A-DNA OCTAMER AT 1.7 ANGSTROMS RESOLUTION | X-RAY DIFFRACTION | 1.7 | 8 | A-form double helix,double helix,structure | |
| 52 | 2PKV|1|A+2PKV|1|B | D-(GGTATACC) ambient pressure | X-RAY DIFFRACTION | 1.6 | 8 | A-form double helix,double helix,structure | |
| 53 | 1D91|1|A+1D91|1|B | G.T BASE PAIRS IN A DNA HELIX. THE CRYSTAL STRUCTURE OF D(G-G-G-G-T-C-C-C) | X-RAY DIFFRACTION | 2.1 | 8 | A-form double helix,double helix,feature,mispair,structure | |
| 54 | 2ANA|1|A+2ANA|1|B | THE CRYSTAL STRUCTURE OF D(G-G-G-G-C-C-C-C). A MODEL FOR POLY(DG).POLY(DC) | X-RAY DIFFRACTION | 2.5 | 8 | A-form double helix,double helix,structure | |
| 55 | 1D92|1|A+1D92|1|B | REFINED CRYSTAL STRUCTURE OF AN OCTANUCLEOTIDE DUPLEX WITH G.T MISMATCHED BASE-PAIRS | X-RAY DIFFRACTION | 2.25 | 8 | double helix,feature,mispair,structure | |
| 56 | 281D|1|A+281D|1|B | CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GGCATGCC) | X-RAY DIFFRACTION | 2.38 | 8 | A-form double helix,double helix,structure | |
| 57 | 3ANA|1|A+3ANA|1|B | THREE-DIMENSIONAL STRUCTURE OF D(GGGATCCC) IN THE CRYSTALLINE STATE | X-RAY DIFFRACTION | 2.5 | 8 | A-form double helix,double helix,structure | |
| 58 | 172D|1|C+172D|1|D | MULTIPLE BINDING MODES OF ANTICANCER DRUG ACTINOMYCIN D: X-RAY, MOLECULAR MODELING, AND SPECTROSCOPIC STUDIES OF D(GAAGCTTC)2-ACTINOMYCIN D COMPLEXES AND ITS HOST DNA | X-RAY DIFFRACTION | 3 | 8 | double helix,structure | |
| 59 | 172D|1|A+172D|1|B | MULTIPLE BINDING MODES OF ANTICANCER DRUG ACTINOMYCIN D: X-RAY, MOLECULAR MODELING, AND SPECTROSCOPIC STUDIES OF D(GAAGCTTC)2-ACTINOMYCIN D COMPLEXES AND ITS HOST DNA | X-RAY DIFFRACTION | 3 | 8 | double helix,structure | |
| 60 | 187D|1|A | HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION | X-RAY DIFFRACTION | 2.25 | 8 | A-form double helix,double helix,structure | |
| 61 | 243D|1|A | STRUCTURE OF THE DNA OCTANUCLEOTIDE D(ACGTACGT)2 | X-RAY DIFFRACTION | 1.9 | 8 | A-form double helix,double helix,structure | |
| 62 | 344D|1|A | DETERMINATION BY MAD-DM OF THE STRUCTURE OF THE DNA DUPLEX D(ACGTACG(5-BRU))2 AT 1.46A AND 100K | X-RAY DIFFRACTION | 1.46 | 8 | A-form double helix,double helix,structure | |
| 63 | 1D93|1|A | STRUCTURAL VARIATION IN D(CTCTAGAG). IMPLICATIONS FOR PROTEIN-DNA INTERACTIONS | X-RAY DIFFRACTION | 2.15 | 8 | A-form double helix,double helix,structure | |
| 64 | 3IFI|1|A | 2'-SeMe-dG modified octamer DNA | X-RAY DIFFRACTION | 1.2 | 8 | double helix,structure | |
| 65 | 2H05|1|A | Br Derivitation of A-DNA Octamer GTG(Ubr)ACAC | X-RAY DIFFRACTION | 1.8 | 8 | A-form double helix,double helix,structure | |
| 66 | 1DNS|1|A | BASE ONLY BINDING OF SPERMINE IN THE DEEP GROOVE OF THE A-DNA OCTAMER D(GTGTACAC) | X-RAY DIFFRACTION | 2 | 8 | A-form double helix,double helix,structure | |
| 67 | 189D|1|A | HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION | X-RAY DIFFRACTION | 2.1 | 8 | A-form double helix,double helix,structure | |
| 68 | 295D|1|A | CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY | X-RAY DIFFRACTION | 1.5 | 8 | A-form double helix,double helix,structure | |
| 69 | 1D82|1|A | CRYSTAL AND MOLECULAR STRUCTURE OF D(GTCTAGAC) | X-RAY DIFFRACTION | 2.5 | 8 | A-form double helix,double helix,structure | |
| 70 | 118D|1|A | CRYSTAL AND MOLECULAR STRUCTURE OF D(GTGCGCAC): INVESTIGATION OF THE EFFECTS OF BASE SEQUENCE ON THE CONFORMATION OF OCTAMER DUPLEXES | X-RAY DIFFRACTION | 1.64 | 8 | A-form double helix,double helix,structure | |
| 71 | 188D|1|A | HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION | X-RAY DIFFRACTION | 2.2 | 8 | A-form double helix,double helix,structure | |
| 72 | 2D95|1|A | LOW-TEMPERATURE STUDY OF THE A-DNA FRAGMENT D(GGGCGCCC) | X-RAY DIFFRACTION | 2 | 8 | A-form double helix,double helix,structure | |
| 73 | 28DN|1|A | CRYSTAL STRUCTURE ANALYSIS OF AN A(DNA) OCTAMER D(GTACGTAC) | X-RAY DIFFRACTION | 2.4 | 8 | A-form double helix,double helix,structure | |
| 74 | 5ANA|1|A | THE CRYSTAL STRUCTURE OF D(GTACGTAC) AT 2.25 ANGSTROMS RESOLUTION. ARE THE A-DNA'S ALWAYS UNWOUND APPROXIMATELY 10 DEGREES AT THE C-G STEPS | X-RAY DIFFRACTION | 2.25 | 8 | A-form double helix,double helix,structure | |
| 75 | 1D26|1|A | EFFECT OF A SINGLE 3'-METHYLENE PHOSPHONATE LINKAGE ON THE CONFORMATION OF AN A-DNA OCTAMER DOUBLE HELIX | X-RAY DIFFRACTION | 2.12 | 8 | A-form double helix,double helix,structure | |
| 76 | 1R3Z|1|A | Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers | X-RAY DIFFRACTION | 1.7 | 8 | A-form double helix,double helix,structure | |
| 77 | 1R41|1|A | Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers | X-RAY DIFFRACTION | 1.9 | 8 | A-form double helix,double helix,structure | |
| 78 | 338D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 1.85 | 8 | A-form double helix,double helix,structure | |
| 79 | 345D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 1.85 | 8 | A-form double helix,double helix,structure | |
| 80 | 341D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 1.75 | 8 | A-form double helix,double helix,structure | |
| 81 | 340D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 1.6 | 8 | A-form double helix,double helix,structure | |
| 82 | 339D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 2.2 | 8 | A-form double helix,double helix,structure | |
| 83 | 2D94|1|A | THE CONFORMATION OF THE DNA DOUBLE HELIX IN THE CRYSTAL IS DEPENDENT ON ITS ENVIRONMENT | X-RAY DIFFRACTION | 1.7 | 8 | A-form double helix,double helix,structure | |
| 84 | 342D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 2.1 | 8 | A-form double helix,double helix,structure | |
| 85 | 346D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 2.1 | 8 | A-form double helix,double helix,structure | |
| 86 | 9DNA|1|A | CRYSTAL STRUCTURE ANALYSIS OF AN A-DNA FRAGMENT AT 1.8 ANGSTROMS RESOLUTION. D(GCCCGGGC) | X-RAY DIFFRACTION | 1.8 | 8 | A-form double helix,double helix,structure | |
| 87 | 337D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 1.85 | 8 | A-form double helix,double helix,structure | |
| 88 | 3IJK|1|A | 5-OMe modified DNA 8mer | X-RAY DIFFRACTION | 1.3 | 8 | A-form double helix,double helix,structure | |
| 89 | 3LTR|1|A | 5-OMe-dU containing DNA 8mer | X-RAY DIFFRACTION | 1.3 | 8 | A-form double helix,double helix,structure | |
| 90 | 3LTU|1|A | 5-SeMe-dU containing DNA 8mer | X-RAY DIFFRACTION | 1.4 | 8 | A-form double helix,double helix,structure | |
| 91 | 3HG8|1|A | Crystal Structure of 5-SMe Derivatized DNA | X-RAY DIFFRACTION | 1.38 | 8 | A-form double helix,double helix,structure | |
| 92 | 3IKI|1|A | 5-SMe-dU containing DNA octamer | X-RAY DIFFRACTION | 1.38 | 8 | A-form double helix,double helix,structure | |
| 93 | 3K18|1|A | Tellurium modified DNA-8mer | X-RAY DIFFRACTION | 1.5 | 8 | A-form double helix,double helix,structure | |
| 94 | 3IJN|1|A | 5-SeMe-Cytidine modified DNA 8mer | X-RAY DIFFRACTION | 1.8 | 8 | A-form double helix,double helix,structure | |
| 95 | 3FA1|1|A | Crystal Structure of Tellurium Derivatized DNA | X-RAY DIFFRACTION | 1.5 | 8 | A-form double helix,double helix,structure | |
| 96 | 2NSK|1|A | Doubled Modified Selenium DNA | X-RAY DIFFRACTION | 1.5 | 8 | A-form double helix,double helix,structure | |
| 97 | 3BM0|1|A | Structure of DNA Octamer G(dUSe)G(5-SedU)ACAC | X-RAY DIFFRACTION | 1.8 | 8 | A-form double helix,double helix,structure | |
| 98 | 2GPX|1|A | 2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC | X-RAY DIFFRACTION | 1.6 | 8 | A-form double helix,double helix,structure | |
| 99 | 2HC7|1|A | 2'-selenium-T A-DNA [G(TSe)GTACAC] | X-RAY DIFFRACTION | 1.4 | 8 | A-form double helix,double helix,structure | |
| 100 | 2DLJ|1|A | 2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC | X-RAY DIFFRACTION | 1.5 | 8 | A-form double helix,double helix,structure | |
| 101 | 3KQ8|1|A | 5-Te-uridine derivatized DNA-8mer | X-RAY DIFFRACTION | 1.6 | 8 | A-form double helix,double helix,structure | |
| 102 | 1Z7I|1|A | 2'-Me-Se Derivitation of A-DNA Octamer G(UMSe)GTACAC | X-RAY DIFFRACTION | 1.28 | 8 | A-form double helix,double helix,structure | |
| 103 | 1OUP|1|C+1OUP|1|D | Crystal structure of the periplasmic endonuclease Vvn complexed with octamer double stranded DNA | X-RAY DIFFRACTION | 2.3 | 8 | double helix,structure | enzyme,hydrolase,nuclease |
| 104 | 1PT3|1|G+1PT3|1|H | Crystal structures of nuclease-ColE7 complexed with octamer DNA | X-RAY DIFFRACTION | 2.5 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 105 | 1PT3|1|E+1PT3|1|F | Crystal structures of nuclease-ColE7 complexed with octamer DNA | X-RAY DIFFRACTION | 2.5 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 106 | 1PT3|1|C+1PT3|1|D | Crystal structures of nuclease-ColE7 complexed with octamer DNA | X-RAY DIFFRACTION | 2.5 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 107 | 1ZTT|1|B+1ZTT|1|G | Netropsin bound to d(CTTAATTCGAATTAAG) in complex with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 1.85 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 108 | 3ORC|1|R+3ORC|1|S | CRYSTAL STRUCTURE OF AN ENGINEERED CRO MONOMER BOUND NONSPECIFICALLY TO DNA | X-RAY DIFFRACTION | 3 | 8 | double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),lambda repressor-like,regulatory,transcription |
| 109 | 2RVE|1|E+2RVE|1|F | THE CRYSTAL STRUCTURE OF ECORV ENDONUCLEASE AND OF ITS COMPLEXES WITH COGNATE AND NON-COGNATE DNA SEGMENTS | X-RAY DIFFRACTION | 3 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 110 | 2C5R|1|Y+2C5R|1|Z | The structure of phage phi29 replication organizer protein p16.7 in complex with double stranded DNA | X-RAY DIFFRACTION | 2.9 | 8 | double helix,structure | DNA replication/repair,regulatory |
| 111 | 1ESG|1|C+1ESG|1|D | RESTRICTION ENDONUCLEASE BAMHI BOUND TO A NON-SPECIFIC DNA. | X-RAY DIFFRACTION | 1.9 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 112 | 3FSI|1|B+3FSI|1|G | Crystal structure of a trypanocidal 4,4'-Bis(imidazolinylamino)diphenylamine bound to DNA | X-RAY DIFFRACTION | 1.75 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 113 | 1DNK|1|C+1DNK|1|B | THE X-RAY STRUCTURE OF THE DNASE I-D(GGTATACC)2 COMPLEX AT 2.3 ANGSTROMS RESOLUTION | X-RAY DIFFRACTION | 2.3 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 114 | 9ICF|1|P+9ICF|1|T | DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND ZNCL2 | X-RAY DIFFRACTION | 3 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 115 | 8ICP|1|P+8ICP|1|T | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-RAY DIFFRACTION | 2.9 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 116 | 9ICV|1|P+9ICV|1|T | DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND ZNCL2 | X-RAY DIFFRACTION | 2.7 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 117 | 8ICU|1|P+8ICU|1|T | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DDATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-RAY DIFFRACTION | 3 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 118 | 8ICR|1|P+8ICR|1|T | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-RAY DIFFRACTION | 2.9 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 119 | 8ICN|1|P+8ICN|1|T | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF ATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-RAY DIFFRACTION | 2.8 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 120 | 8ICK|1|P+8ICK|1|T | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR), MGCL2 (5 MILLIMOLAR), AND MNCL2 (5 MILLIMOLAR) | X-RAY DIFFRACTION | 2.7 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 121 | 8ICA|1|T+8ICA|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND CACL2 (5 MILLIMOLAR) | X-RAY DIFFRACTION | 3 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 122 | 8ICI|1|T+8ICI|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND MGCL2 (5 MILLIMOLAR) | X-RAY DIFFRACTION | 2.8 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 123 | 8ICX|1|T+8ICX|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-RAY DIFFRACTION | 3 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 124 | 1ZQF|1|T+1ZQF|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CSCL (150 MILLIMOLAR) | X-RAY DIFFRACTION | 2.9 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 125 | 1ZQN|1|T+1ZQN|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF BACL2 (15 MILLIMOLAR) AND NACL (15 MILLIMOLAR) | X-RAY DIFFRACTION | 3 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 126 | 1ZQI|1|T+1ZQI|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (150 MILLIMOLAR) | X-RAY DIFFRACTION | 2.7 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 127 | 1ZQP|1|T+1ZQP|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (75 MILLIMOLAR) AND NACL (75 MILLIMOLAR) | X-RAY DIFFRACTION | 2.8 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 128 | 8ICO|1|T+8ICO|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF AZT-TP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-RAY DIFFRACTION | 2.7 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 129 | 8ICC|1|T+8ICC|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA (NO 5'-PHOSPHATE) | X-RAY DIFFRACTION | 2.8 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 130 | 8ICQ|1|T+8ICQ|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF OF DATP (0.1 MILLIMOLAR) AND MNCL2 (0.5 MILLIMOLAR) | X-RAY DIFFRACTION | 3 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 131 | 9ICA|1|T+9ICA|1|P | DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-O-(1-THIOTRIPHOSPHATE), SOAKED IN THE PRESENCE OF DATP(ALPHA)S AND MNCL2 | X-RAY DIFFRACTION | 3 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 132 | 8ICS|1|T+8ICS|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) | X-RAY DIFFRACTION | 2.9 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 133 | 8ICF|1|T+8ICF|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (10 MILLIMOLAR) AND MGCL2 (50 MILLIMOLAR) | X-RAY DIFFRACTION | 2.9 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 134 | 8ICM|1|T+8ICM|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR), MNCL2 (5 MILLIMOLAR), AND AMMONIUM SULFATE (75 MILLIMOLAR) | X-RAY DIFFRACTION | 2.9 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 135 | 9ICH|1|T+9ICH|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND ZNCL2 (1 MILLIMOLAR) | X-RAY DIFFRACTION | 2.9 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 136 | 9ICG|1|T+9ICG|1|P | DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND ZNCL2 (1 MILLIMOLAR) | X-RAY DIFFRACTION | 3 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 137 | 2RVE|1|C+2RVE|1|D | THE CRYSTAL STRUCTURE OF ECORV ENDONUCLEASE AND OF ITS COMPLEXES WITH COGNATE AND NON-COGNATE DNA SEGMENTS | X-RAY DIFFRACTION | 3 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 138 | 2BPF|1|T+2BPF|1|P | STRUCTURES OF TERNARY COMPLEXES OF RAT DNA POLYMERASE BETA, A DNA TEMPLATE-PRIMER, AND DDCTP | X-RAY DIFFRACTION | 2.9 | 8 | double helix,structure | enzyme,polymerase,transferase |
| 139 | 2DNJ|1|B+2DNJ|1|C | DNASE I-INDUCED DNA CONFORMATION. 2 ANGSTROMS STRUCTURE OF A DNASE I-OCTAMER COMPLEX | X-RAY DIFFRACTION | 2 | 8 | double helix,structure | enzyme,hydrolase,nuclease |
| 140 | 1OUP|1|F+1OUP|1|E+1OUP|1|G | Crystal structure of the periplasmic endonuclease Vvn complexed with octamer double stranded DNA | X-RAY DIFFRACTION | 2.3 | 8 | double helix,structure | enzyme,hydrolase,nuclease |
| 141 | 2R2U|1|G+2R2U|1|B | Co(III)bleomycinB2 bithiazole/C-terminal tail domain bound to d(ATTTAGTTAACTAAAT) complexed with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 2.3 | 8 | enzyme,polymerase,transferase | |
| 142 | 305D|1|A | SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICATATIC) IN THE TETRAGONAL FORM | X-RAY DIFFRACTION | 2.17 | 8 | double helix,structure | |
| 143 | 306D|1|A | SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICITACIC) | X-RAY DIFFRACTION | 1.6 | 8 | B-form double helix,double helix,structure | |
| 144 | 159D|1|A | SIDE BY SIDE BINDING OF TWO DISTAMYCIN A DRUGS IN THE MINOR GROOVE OF AN ALTERNATING B-DNA DUPLEX | X-RAY DIFFRACTION | 1.8 | 8 | B-form double helix,double helix,structure | |
| 145 | 304D|1|A | SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICATATIC) IN THE MONOCLINIC FORM | X-RAY DIFFRACTION | 1.9 | 8 | B-form double helix,double helix,structure | |
| 146 | 1JUX|1|A | 1.6A Resolution Crystal Structures of the DNA Octamers d(IUATATAC) and d(ITITACAC):Binding of Two Distamycin Drugs Side-by-Side | X-RAY DIFFRACTION | 1.6 | 8 | B-form double helix,double helix,structure | |
| 147 | 378D|1|C+378D|1|D | STRUCTURE OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN TO DNA | X-RAY DIFFRACTION | 2.4 | 8 | B-form double helix,double helix,structure | |
| 148 | 378D|1|A+378D|1|B | STRUCTURE OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN TO DNA | X-RAY DIFFRACTION | 2.4 | 8 | B-form double helix,double helix,structure | |
| 149 | 250D|1|E+250D|1|F | STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES | X-RAY DIFFRACTION | 2.47 | 8 | B-form double helix,double helix,structure | |
| 150 | 250D|1|A+250D|1|B | STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES | X-RAY DIFFRACTION | 2.47 | 8 | B-form double helix,double helix,structure | |
| 151 | 250D|1|C+250D|1|D | STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES | X-RAY DIFFRACTION | 2.47 | 8 | B-form double helix,double helix,structure | |
| 152 | 2R2T|1|B+2R2T|1|G | d(ATTTAGTTAACTAAAT) complexed with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 2 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 153 | 2FJW|1|B+2FJW|1|G | d(CTTGAATGCATTCAAG) in complex with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 1.95 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 154 | 2FJX|1|B+2FJX|1|G | RT29 bound to D(CTTGAATGCATTCAAG) in complex with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 1.8 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 155 | 2R2R|1|B+2R2R|1|G | d(ATTAGTTATAACTAAT) complexed with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 2.1 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 156 | 1QAI|1|C+1QAI|1|D | CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN | X-RAY DIFFRACTION | 2.3 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 157 | 1ZTW|1|B+1ZTW|1|G | d(CTTAATTCGAATTAAG) complexed with Moloney Murine Leukemia Virus Reverse Transcriptase catalytic fragment | X-RAY DIFFRACTION | 1.8 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 158 | 2FJV|1|B+2FJV|1|G | RT29 Bound to D(CTTAATTCGAATTAAG) in complex with MMLV RT Catalytic Fragment | X-RAY DIFFRACTION | 2.05 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 159 | 3ODC|1|C+3ODC|1|D | Human PARP-1 zinc finger 2 (Zn2) bound to DNA | X-RAY DIFFRACTION | 2.8 | 8 | B-form double helix,double helix,structure | DNA replication/repair,enzyme,regulatory,transferase |
| 160 | 3ODC|1|E+3ODC|1|F | Human PARP-1 zinc finger 2 (Zn2) bound to DNA | X-RAY DIFFRACTION | 2.8 | 8 | B-form double helix,double helix,structure | DNA replication/repair,enzyme,regulatory,transferase |
| 161 | 3ODE|1|E+3ODE|1|F | Human PARP-1 zinc finger 2 (Zn2) bound to DNA | X-RAY DIFFRACTION | 2.95 | 8 | B-form double helix,double helix,structure | DNA replication/repair,enzyme,regulatory,transferase |
| 162 | 3ODE|1|C+3ODE|1|D | Human PARP-1 zinc finger 2 (Zn2) bound to DNA | X-RAY DIFFRACTION | 2.95 | 8 | B-form double helix,double helix,structure | DNA replication/repair,enzyme,regulatory,transferase |
| 163 | 1QAJ|1|C+1QAJ|1|D | CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN | X-RAY DIFFRACTION | 2.3 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 164 | 3IGM|1|C+3IGM|1|D | A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA | X-RAY DIFFRACTION | 2.2 | 8 | regulatory,transcription | |
| 165 | 1TAU|1|P+1TAU|1|T | TAQ POLYMERASE (E.C.2.7.7.7)/DNA/B-OCTYLGLUCOSIDE COMPLEX | X-RAY DIFFRACTION | 3 | 8 | double helix,structure | enzyme,polymerase,transferase |
| 166 | 2R2S|1|G+2R2S|1|B | Co(III)bleomycinB2 bound to d(ATTAGTTATAACTAAT) complexed with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 2.8 | 8 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 167 | 3A4K|1|F+3A4K|1|J+3A4K|1|E+3A4K|1|I | Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA and divalent cations at 2.17 angstrom resolution | X-RAY DIFFRACTION | 2.17 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 168 | 3A4K|1|H+3A4K|1|L+3A4K|1|G+3A4K|1|K | Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA and divalent cations at 2.17 angstrom resolution | X-RAY DIFFRACTION | 2.17 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 169 | 173D|1|B | MULTIPLE BINDING MODES OF ANTICANCER DRUG ACTINOMYCIN D: X-RAY, MOLECULAR MODELING, AND SPECTROSCOPIC STUDIES OF D(GAAGCTTC)2-ACTINOMYCIN D COMPLEXES AND ITS HOST DNA | X-RAY DIFFRACTION | 3 | 8 | double helix,intercalating,ligand,structure | |
| 170 | 316D|1|A+316D|1|B | Selectivity of F8-actinomycin D for RNA:DNA hybrids and its anti-leukemia activity | X-RAY DIFFRACTION | 3 | 8 | double helix,structure | |
| 171 | 209D|1|A+209D|1|B | Structural, physical and biological characteristics of RNA:DNA binding agent N8-actinomycin D | X-RAY DIFFRACTION | 3 | 8 | double helix,structure | |
| 172 | 1VAQ|1|A+1VAQ|1|B | Crystal structure of the Mg2+-(chromomycin A3)2-d(TTGGCCAA)2 complex reveals GGCC binding specificity of the drug dimer chelated by metal ion | X-RAY DIFFRACTION | 2 | 8 | double helix,structure | |
| 173 | 1VAQ|1|C+1VAQ|1|D | Crystal structure of the Mg2+-(chromomycin A3)2-d(TTGGCCAA)2 complex reveals GGCC binding specificity of the drug dimer chelated by metal ion | X-RAY DIFFRACTION | 2 | 8 | double helix,structure | |
| 174 | 3IGM|1|W+3IGM|1|X | A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA | X-RAY DIFFRACTION | 2.2 | 8 | regulatory,transcription | |
| 175 | 1QPS|1|N | THE CRYSTAL STRUCTURE OF A POST-REACTIVE COGNATE DNA-ECO RI COMPLEX AT 2.50 A IN THE PRESENCE OF MN2+ ION | X-RAY DIFFRACTION | 2.5 | 8 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
| 176 | 2W42|1|P+2W42|1|Q | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX. | X-RAY DIFFRACTION | 1.9 | 8 | B-form double helix,double helix,structure | gene silencing,regulatory |
| 177 | 2W42|1|R+2W42|1|S | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX. | X-RAY DIFFRACTION | 1.9 | 8 | B-form double helix,double helix,structure | gene silencing,regulatory |
| 178 | 2GOT|1|B | Crystal structure of d(GCGAACGC): two types of bulge-containing duplexes | X-RAY DIFFRACTION | 2.602 | 8 | B-form double helix,double helix,structure |
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