#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
13OMJ|1|A+ 3OMJ|1|B (rep)5'-D(*CP*(C38)P*AP*GP*TP*AP*CP*TP*GP*G)-3'Structural Basis for Cyclic Py-Im Polyamide Allosteric Inhibition of Nuclear Receptor BindingX-ray diffraction0.952010-09-08
21KGK|1|A+ 1KGK|1|B5'-D(*GP*(GCK)P*GP*TP*AP*TP*AP*CP*GP*C)-3'Direct Observation of a Cytosine Analog that Forms Five Hydrogen Bonds to Guanosine; Guanyl G-ClampX-ray diffraction12001-12-21
31DPL|1|A+ 1DPL|1|B5'-D(*GP*CP*GP*TP*AP*(T23)P*AP*CP*GP*C)-3'A-DNA DECAMER GCGTA(T23)TACGC WITH INCORPORATED 2'-METHOXY-3'-METHYLENEPHOSPHATE-THYMIDINEX-ray diffraction0.832000-04-04
43I5E|1|A5'-D(*CP*CP*AP*GP*GP*CP*CP*TP*GP*G)-3'Allosteric Modulation of DNA by Small MoleculesX-ray diffraction0.982009-07-28
51EN8|1|ADNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*GP*G)-3')1 A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUMX-ray diffraction0.9852000-09-25
61ENE|1|ADNA (5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3')1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM.X-ray diffraction0.9852000-09-25
73I5L|1|A+ 3I5L|1|B5'-D(*CP*CP*AP*GP*GP*(C38)P*CP*TP*GP*G)-3'Allosteric Modulation of DNA by Small MoleculesX-ray diffraction1.182009-07-28
83EY2|1|A+ 3EY2|1|B5'-D(*GP*CP*GP*TP*AP*(USM)P*AP*CP*GP*C)-3'A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High ResolutionX-ray diffraction1.042009-04-28
91EN9|1|ADNA (5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3')1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM.X-ray diffraction0.9852000-09-25
101EN3|1|ADNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*GP*G)-3')1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUMX-ray diffraction0.9852000-09-25
111MLX|1|A+ 1MLX|1|B5'-D(*GP*CP*GP*TP*AP*SMTP*AP*CP*GP*C)-3'Crystal Structure Analysis of a 2'-O-[2-(Methylthio)-ethyl]-Modified Oligodeoxynucleotide DuplexX-ray diffraction1.252002-12-04
123OZ5|1|A+ 3OZ5|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(UMX)P*AP*CP*GP*C)-3')S-Methyl Carbocyclic LNAX-ray diffraction1.362010-11-24
132FIJ|1|A+ 2FIJ|1|B5'-D(*GP*CP*GP*TP*(A2M)P*(UAR)P*AP*CP*GP*C)-3'Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-aU-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and Arabino-Uridine (aU)X-ray diffraction1.192006-05-23
141M77|1|A5'-D(*CP*CP*CP*GP*AP*TP*CP*GP*GP*G)-3'Near Atomic Resolution Crystal Structure of an A-DNA Decamer d(CCCGATCGGG): Cobalt Hexammine Interactions with A-DNAX-ray diffraction1.252003-01-07
151PWF|1|A+ 1PWF|1|B5'-D(*GP*CP*GP*TP*AP*(2MU)P*(FA2)P*CP*GP*C)-3'One Sugar Pucker Fits All: Pairing Versatility Despite Conformational Uniformity in TNAX-ray diffraction1.162004-07-13
161R3G|1|A+ 1R3G|1|B5'-D(*GP*CP*GP*TP*AP*(GMU)P*AP*CP*GP*C)-3')1.16A X-ray structure of the synthetic DNA fragment with the incorporated 2'-O-[(2-Guanidinium)ethyl]-5-methyluridine residuesX-ray diffraction1.162003-10-21
171I5W|1|A+ 1I5W|1|B5'-D(*GP*CP*GP*TP*AP*(TLN)P*AP*CP*GP*C)-3'A-DNA DECAMER GCGTA(TLN)ACGCX-ray diffraction1.42001-04-04
181Y84|1|A+ 1Y84|1|B5'-D(*GP*CP*GP*TP*AP*(EIT)P*AP*CP*GP*C)-3'Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(imidazolyl)ethyl] Thymidine (T*)X-ray diffraction1.62005-06-28
191Y9F|1|A+ 1Y9F|1|B5'-D(*GP*CP*GP*TP*AP*(2AT)P*AP*CP*GP*C)-3')Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-allyl Thymidine (T*)X-ray diffraction1.62005-06-28
201YB9|1|A+ 1YB9|1|B5'-D(*GP*CP*GP*TP*AP*(2OT)P*AP*CP*GP*C)-3')Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(N,N-dimethylaminooxy)ethyl] Thymidine (T*)X-ray diffraction1.652005-06-28
211Y7F|1|A+ 1Y7F|1|B5'-D(*GP*CP*GP*TP*AP*(2NT)P*AP*CP*GP*C)-3')Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-[hydroxy(methyleneamino)oxy]ethyl] Thymidine (T*)X-ray diffraction1.62005-06-28
221Y8L|1|A+ 1Y8L|1|B5'-D(*GP*CP*GP*TP*AP*(TFE)P*AP*CP*GP*C)-3')Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(trifluoro)ethyl] Thymidine (T*)X-ray diffraction1.52005-06-28
231Y86|1|A+ 1Y86|1|B5'-D(*GP*CP*GP*TP*AP*(125)P*AP*CP*GP*C)-3'Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(fluoro)ethyl] Thymidine (T*)X-ray diffraction1.72005-06-28
241Y9S|1|A+ 1Y9S|1|B5'-D(*GP*CP*GP*TP*AP*(2GT)P*AP*CP*GP*C)-3')Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-propargyl Thymidine (T*)X-ray diffraction1.552005-06-28
253OZ3|1|A+ 3OZ3|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(UVX)P*AP*CP*GP*C)-3')Vinyl Carbocyclic LNAX-ray diffraction1.572010-11-24
263PA0|1|ADNA 5'-D(*AP*TP*CP*TP*GP*TP*GP*GP*TP*C)-3'synthetic constructCrystal Structure of Chiral Gamma-PNA with Complementary DNA Strand: Insight Into the Stability and Specificity of Recognition an Conformational PreorganizationX-ray diffraction1.62010-12-29
273PA0|1|BDNA 5'-D(*AP*TP*CP*TP*GP*TP*GP*GP*TP*C)-3'synthetic constructCrystal Structure of Chiral Gamma-PNA with Complementary DNA Strand: Insight Into the Stability and Specificity of Recognition an Conformational PreorganizationX-ray diffraction1.62010-12-29
281Y8V|1|A+ 1Y8V|1|B5'-D(*GP*CP*GP*TP*AP*(P2T)P*AP*CP*GP*C)-3'Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-propyl Thymidine (T*)X-ray diffraction1.52005-06-28
292FIL|1|A+ 2FIL|1|B5'-D(*GP*CP*GP*TP*(A2M)P*(TAF)P*AP*CP*GP*C)-3'Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-faT-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and 2'-Fluoroarabino-Thymidine (faT)X-ray diffraction1.692006-05-23
302FIL|1|C+ 2FIL|1|D5'-D(*GP*CP*GP*TP*(A2M)P*(TAF)P*AP*CP*GP*C)-3'Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-faT-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and 2'-Fluoroarabino-Thymidine (faT)X-ray diffraction1.692006-05-23
313JY1|1|B+ 3JY1|1|CDNA (5'-D(*TP*GP*GP*GP*(3DR)P*GP*GP*CP*TP*T)-3'), DNA (5'-D(*AP*AP*AP*GP*CP*CP*CP*CP*CP*C)-3')Bacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing an Abasic Site (across from C)X-ray diffraction1.7542010-09-22
321I0J|1|A+ 1I0J|1|B5'-D(*GP*CP*GP*TP*AP*(T23)P*AP*CP*GP*C)-3'1.06 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-3'-METHYLENEPHOSPHONATE (T23) THYMINE IN PLACE OF T6, HIGH CS-SALTX-ray diffraction1.062001-04-04
331YBC|1|A+ 1YBC|1|B5'-D(*GP*CP*GP*TP*AP*(BOE)P*AP*CP*GP*C)-3')Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(benzyloxy)ethyl] Thymidine (T*)X-ray diffraction1.82005-06-28
342OKS|1|A5'-D(*CP*CP*AP*AP*(C34)P*GP*TP*TP*GP*G)-3'X-ray Structure of a DNA Repair Substrate Containing an Alkyl Interstrand Crosslink at 1.65 ResolutionX-ray diffraction1.652007-02-13
351NZG|1|A+ 1NZG|1|B5'-D(*GP*CP*GP*TP*AP*(3ME)P*AP*CP*GP*C)-3'Crystal structure of A-DNA decamer GCGTA(3ME)ACGC, with a modified 5-methyluridineX-ray diffraction1.62003-08-26
361NR8|1|A5'-D(P*AP*GP*TP*GP*AP*TP*CP*TP*AP*C)-3'The crystal structure of a D-Lysine-based chiral PNA-DNA duplexX-ray diffraction1.662003-10-28
373M7K|1|B+ 3M7K|1|CDNA (5'-D(*GP*AP*GP*GP*CP*TP*TP*AP*AP*T)-3'), DNA (5'-D(P*TP*AP*AP*GP*CP*CP*TP*C)-3')Crystal structure of PacI-DNA Enzyme product complexX-ray diffraction1.922010-04-21
383OZ4|1|A+ 3OZ4|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(URX)P*AP*CP*GP*C)-3')R-Methyl Carbocyclic LNAX-ray diffraction1.592010-11-24
391IKK|1|A+ 1IKK|1|B5'-D(*CP*CP*TP*TP*TP*AP*AP*AP*GP*G)-3'Intrinsic Bending and Deformability at the T-A step of CCTTTAAAGG: A Comparative Analysis of T-A and A-T steps within A-tractsX-ray diffraction1.62001-10-05
401ZF1|1|A+ 1ZF1|1|B5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3'CCC A-DNAX-ray diffraction1.352005-05-10
412WIW|1|C+ 2WIW|1|D5'-D(*DC*DG*DG*DA*DT*DA*DT*DC*DC*DGP)-3'synthetic constructCrystal structures of Holliday junction resolvases from Archaeoglobus fulgidus bound to DNA substrateX-ray diffraction1.82009-05-26
421ZF3|1|A+ 1ZF3|1|B5'-D(*CP*CP*GP*AP*TP*AP*TP*CP*GP*G)-3'ATC Four-stranded DNA Holliday JunctionX-ray diffraction1.842005-05-10
431ZF9|1|A+ 1ZF9|1|B5'-D(*CP*CP*CP*CP*CP*GP*GP*GP*GP*G)-3'GGG Duplex A-DNAX-ray diffraction1.382005-05-10
441ZFG|1|A+ 1ZFG|1|B5'-D(*CP*CP*GP*AP*GP*CP*TP*CP*GP*G)-3'CTC Duplex B-DNAX-ray diffraction1.752005-05-10
453HPO|1|C+ 3HPO|1|B5'-D(P*GP*GP*CP*GP*TP*GP*AP*TP*CP*G)-3', 5'-D(*CP*GP*AP*TP*CP*AP*CP*GP*(DOC))-3'Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus Y714S mutant bound to G:T mismatchX-ray diffraction1.752010-06-23
46473D|1|A+ 473D|1|BDNA (5'-D(*CP*GP*TP*AP*TP*AP*TP*AP*CP*G)-3')NI2+/GUANINE INTERACTIONS AND NETROPSIN/GUANINE STACKING IN D(CGTATATACG)2X-ray diffraction1.581999-12-02
471ZF7|1|A+ 1ZF7|1|B5'-D(*CP*CP*GP*TP*CP*GP*AP*CP*GP*G)-3'GAC Duplex B-DNAX-ray diffraction1.052005-05-10
482BDP|1|T+ 2BDP|1|PDNA (5'-D(P*AP*GP*CP*AP*TP*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*AP*TP*GP*C)-3')CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNAX-ray diffraction1.81999-01-13
491ZEX|1|A+ 1ZEX|1|B5'-D(*CP*CP*CP*GP*GP*CP*CP*GP*GP*G)-3'CCG A-DNAX-ray diffraction1.652005-05-10
501ZF8|1|A+ 1ZF8|1|B5'-D(*CP*CP*AP*CP*CP*GP*GP*TP*GP*G)-3'GGT Duplex A-DNAX-ray diffraction1.482005-05-10
511NVY|1|A+ 1NVY|1|Bd(TCGGTACCGA)4Strontium bound to the Holliday junction sequence d(TCGGTACCGA)4X-ray diffraction1.52003-02-25
522VOA|1|C+ 2VOA|1|D5'-D(*GP*CP*GP*GP*TP*AP*GP*CP*CP*GP)-3', 5'-D(*CP*GP*GP*CP*TP*AP*CP*CP*GP*CP)-3'synthetic constructStructure of an AP Endonuclease from Archaeoglobus fulgidusX-ray diffraction1.72008-12-09
531P54|1|A+ 1P54|1|B5'-D(*CP*CP*AP*GP*TP*AP*CP*(BRU)P*GP*G)-3'Effect of Sequence on the Conformational Geometry of DNA Holliday JunctionsX-ray diffraction1.92003-09-02
542AXB|1|A+ 2AXB|1|B5'-D(*GP*CP*GP*TP*AP*(S2M)P*AP*CP*GP*C)-3')Crystal Structure Analysis Of A 2-O-[2-(methoxy)ethyl]-2-thiothymidine Modified Oligodeoxynucleotide DuplexX-ray diffraction1.612005-11-01
553LDY|1|C+ 3LDY|1|BDNA (5'-D(P*AP*TP*TP*AP*AP*GP*CP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*GP*CP*TP*TP*A)-3')An extraordinary mechanism of DNA perturbation exhibited by the rare-cutting HNH restriction endonuclease PacIX-ray diffraction1.972010-04-21
562ORF|1|A+ 2ORF|1|BDNA (5'-D(*CP*CP*GP*GP*TP*AP*(BRU)P*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3')Directing Macromolecular Conformation Through Halogen BondsX-ray diffraction1.852007-03-27
571ZF0|1|A+ 1ZF0|1|B5'-D(*CP*CP*GP*TP*TP*AP*AP*CP*GP*G)-3'B-DNAX-ray diffraction1.52005-05-10
581P4Y|1|A+ 1P4Y|1|B5'-D(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3'Effect of Sequence on the Conformational Geometry of DNA Holliday JunctionsX-ray diffraction1.72003-09-02
591ZF5|1|A5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3'GCT duplex B-DNAX-ray diffraction0.992005-05-10
601SA3|1|C+ 1SA3|1|D5'-D(*CP*CP*CP*CP*CP*GP*GP*GP*GP*G)-3'An asymmetric complex of restriction endonuclease MspI on its palindromic DNA recognition siteX-ray diffraction1.952004-09-07
611SA3|1|E+ 1SA3|1|F5'-D(*CP*CP*CP*CP*CP*GP*GP*GP*GP*G)-3'An asymmetric complex of restriction endonuclease MspI on its palindromic DNA recognition siteX-ray diffraction1.952004-09-07
622B1B|1|A+ 2B1B|1|B5'-D(*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3'5'-D(*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3' Zif268 binding siteX-ray diffraction1.92005-09-27
631WD0|1|B+ 1WD0|1|C5'-D(*CP*CP*TP*AP*TP*AP*TP*AP*GP*G)-3'Crystal structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamersX-ray diffraction1.92004-08-03
643BDP|1|P+ 3BDP|1|TDNA (5'-D(*GP*CP*AP*TP*GP*AP*TP*GP*CP*2DT)-3'), DNA (5'-D(*AP*GP*CP*AP*TP*CP*AP*TP*GP*C)-3')DNA POLYMERASE I/DNA COMPLEXX-ray diffraction1.91999-01-13
651S23|1|A5'-D(*CP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3'Crystal Structure Analysis of the B-DNA Decamer CGCAATTGCGX-ray diffraction1.62004-04-06
661NVN|1|A+ 1NVN|1|B5'-D(CpCpGpGpTpApCpCpGpG)-3'Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 1.8 AX-ray diffraction1.82003-02-25
671I6J|1|C+ 1I6J|1|B5'-D(*AP*CP*GP*GP*GP*AP*CP*GP*AP*C)-3', 5'-D(*GP*TP*CP*GP*TP*C)-3'CRYSTAL STRUCTURE OF A PSEUDO-16-MER DNA WITH STACKED GUANINES AND TWO G-A MISPAIRS COMPLEXED WITH THE N-TERMINAL FRAGMENT OF MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASEX-ray diffraction22001-09-07
681ZF4|1|A+ 1ZF4|1|B5'-D(*CP*CP*GP*AP*TP*AP*TP*CP*GP*G)-3'ATC Four-stranded DNA Holliday JunctionX-ray diffraction1.652005-05-10
691ZFB|1|A+ 1ZFB|1|B5'-D(*CP*CP*GP*CP*CP*GP*GP*CP*GP*G)-3'GGC Duplex B-DNAX-ray diffraction1.652005-05-10
701L6B|1|A+ 1L6B|1|B5'-D(*CP*CP*GP*GP*TP*AP*CP*(5CM)P*GP*G)-3'CRYSTAL STRUCTURE ANALYSIS OF THE ALL DNA HOLLIDAY JUNCTION STRUCTURE OF CCGGTACM5CGGX-ray diffraction1.52002-08-07
713IGT|1|A+ 3IGT|1|B+ 3IGT|1|C+ 3IGT|1|D5'-D(*CP*CP*GP*AP*GP*TP*CP*CP*TP*A)-3', 5'-D(*CP*TP*CP*AP*AP*CP*TP*CP*GP*G)-3', 5'-D(*TP*CP*GP*GP*CP*CP*TP*GP*AP*G)-3', 5'-D(*TP*AP*GP*GP*GP*GP*CP*CP*GP*A)-3'A rare nucleotide base tautomer in the structure of an asymmetric DNA junctionX-ray diffraction1.92009-08-18
723IFF|1|A+ 3IFF|1|BDNA (5'-D(*GP*TP*AP*CP*GP*CP*GP*TP*(XUA)P*C)-3')2'-SeMe-A modified DNA decamerX-ray diffraction1.752009-08-11
731ZF2|1|A+ 1ZF2|1|B5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3'Four-stranded DNA Holliday Junction (CCC)X-ray diffraction1.952005-05-10
741I0O|1|A+ 1I0O|1|B5'-D(*GP*CP*GP*TP*AP*(T23)P*AP*CP*GP*C)-3'1.6 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-3'-METHYLENEPHOSPHONATE THYMINE IN PLACE OF T6, HIGH K-SALTX-ray diffraction22001-04-04
751P4Z|1|A5'-D(*CP*CP*AP*GP*TP*AP*CP*TP*GP*G)-3'Effect of Sequence on the Conformational Geometry of DNA Holliday JunctionsX-ray diffraction22003-09-02
761ZF6|1|A+ 1ZF6|1|B5'-D(*CP*CP*CP*CP*AP*TP*GP*GP*GP*G)-3'TGG DUPLEX A-DNAX-ray diffraction1.52005-05-10
772ORH|1|A+ 2ORH|1|BDNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*TP*AP*(DU)P*CP*GP*G)-3')Directing Macromolecular Conformation Through Halogen BondsX-ray diffraction1.92007-03-27
781S1K|1|A5'-D(*CP*CP*(1AP)P*GP*TP*AP*CP*TP*GP*G)-3'INFLUENCE OF GROOVE INTERACTIONS ON DNA HOLLIDAY JUNCTION FORMATIONX-ray diffraction1.92004-08-31
791ZFA|1|A+ 1ZFA|1|B5'-D(*CP*CP*TP*CP*CP*GP*GP*AP*GP*G)-3'GGA Duplex A-DNAX-ray diffraction1.562005-05-10
801ZEZ|1|A+ 1ZEZ|1|B5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3'ACC Holliday JunctionX-ray diffraction22005-05-10
812ORG|1|A+ 2ORG|1|BDNA (5'-D(*CP*CP*GP*GP*TP*AP*(BRU)P*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3')Directing Macromolecular Conformation Through Halogen BondsX-ray diffraction22007-03-27
821ZFC|1|A+ 1ZFC|1|B5'-D(*CP*CP*GP*AP*TP*AP*TP*CP*GP*G)-3'ATC Duplex B-DNAX-ray diffraction22005-05-10
831NT8|1|A+ 1NT8|1|B5'-d(CpCpGpGpTpApCpCpGpG)-3'Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 2.00 AX-ray diffraction22003-02-11
841L4J|1|A+ 1L4J|1|B+ 1L4J|1|C+ 1L4J|1|D5'-D(*TP*CP*GP*GP*TP*AP*CP*CP*GP*A)-3'Holliday Junction TCGGTACCGA with Na and Ca Binding Sites.X-ray diffraction1.852003-03-04
851M6G|1|A+ 1M6G|1|B5'-D(*TP*CP*GP*GP*TP*AP*CP*CP*GP*A)-3'Structural Characterisation of the Holliday Junction TCGGTACCGAX-ray diffraction1.6522003-05-06
861ZEY|1|A+ 1ZEY|1|B5'-D(*CP*CP*CP*CP*GP*CP*GP*GP*GP*G)-3'CGG A-DNAX-ray diffraction1.72005-05-10
873PBX|1|A+ 3PBX|1|BDNAStrontium bound to the sequence d(CCGGCGCCGG)X-ray diffraction1.8792011-02-02
881NQS|1|A+ 1NQS|1|B5'-d(TpCpGpGpTpApCpCpGpA)-3'Structural Characterisation of the Holliday Junction formed by the sequence d(TCGGTACCGA) at 1.97 AX-ray diffraction1.972003-02-04
891Z8V|1|A+ 1Z8V|1|B(5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3')The Structure of d(GGCCAATTGG) Complexed with NetropsinX-ray diffraction1.752006-03-14
901ZFF|1|A5'-D(*CP*CP*GP*AP*AP*TP*TP*CP*GP*G)-3'TTC Duplex B-DNAX-ray diffraction0.942005-05-10
913GGK|1|A5'-D(*CP*CP*AP*GP*GP*CP*CP*TP*GP*G) -3'Locating monovalent cations in one turn of G/C rich B-DNAX-ray diffraction0.872010-03-09
921SK5|1|A+ 1SK5|1|B5'-D(*CP*TP*TP*TP*TP*AP*AP*AP*AP*G)-3'The ultra-high resolution structure of d(CTTTTAAAAG)2: modulation of bending by T-A steps and its role in DNA recognitionX-ray diffraction0.892005-06-21
933GGI|1|A5'-D(*CP*CP*AP*GP*GP*CP*CP*TP*GP*G) -3'Locating monovalent cations in one turn of G/C rich B-DNAX-ray diffraction0.982010-03-09
94440D|1|A+ 440D|1|BDNA (5'-D(*AP*GP*GP*GP*GP*CP*CP*CP*CP*T)-3')HIGH RESOLUTION A-DNA CRYSTAL STRYCTURES OF D(AGGGGCCCCT): AN A-DNA MODEL OF POLY(DG).POLY(DC)X-ray diffraction1.11999-01-15
95431D|1|A+ 431D|1|BDNA (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3')5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'X-ray diffraction1.151999-09-15
961XUW|1|A+ 1XUW|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(NMT)P*AP*CP*GP*C)-3')Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogsX-ray diffraction1.252004-12-14
971XUX|1|A+ 1XUX|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(NMS)P*AP*CP*GP*C)-3')Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogsX-ray diffraction1.32004-12-14
981MA8|1|A+ 1MA8|1|B5'-D(*GP*CP*GP*TP*AP*UMSP*AP*CP*GP*C)-3'A-DNA decamer GCGTA(UMS)ACGC with incorporated 2'-methylseleno-uridineX-ray diffraction1.32002-12-11
991D61|1|ADNA (5'-D(*CP*CP*AP*AP*CP*IP*TP*TP*GP*G)-3')THE STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-I-T-T-G-G: MONOCLINIC FORMX-ray diffraction1.31993-04-15
1003DNB|1|ADNA (5'-D(*CP*CP*AP*AP*GP*AP*TP*TP*GP*G)-3')HELIX GEOMETRY, HYDRATION, AND G.A MISMATCH IN A B-DNA DECAMERX-ray diffraction1.31989-01-09
1011XUX|1|C+ 1XUX|1|DDNA (5'-D(*GP*CP*GP*TP*AP*(NMS)P*AP*CP*GP*C)-3')Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogsX-ray diffraction1.32004-12-14
1025DNB|1|ADNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*GP*G)-3')STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-G-T-T-G-G AND COMPARISON WITH ISOMORPHOUS DECAMERS C-C-A-A-G-A-T-T-G-G AND C-C-A-G-G-C-C-T-G-GX-ray diffraction1.41991-10-15
1031D49|1|A+ 1D49|1|BDNA (5'-D(*CP*GP*AP*TP*TP*AP*AP*TP*CP*G)-3')THE STRUCTURE OF A B-DNA DECAMER WITH A CENTRAL T-A STEP: C-G-A-T-T-A-A-T-C-GX-ray diffraction1.51992-04-15
1041D23|1|A+ 1D23|1|BDNA (5'-D(*CP*GP*AP*TP*CP*GP*AP*TP*CP*G)-3')THE STRUCTURE OF B-HELICAL C-G-A-T-C-G-A-T-C-G AND COMPARISON WITH C-C-A-A-C-G-T-T-G-G. THE EFFECT OF BASE PAIR REVERSALSX-ray diffraction1.51991-10-15
1051CW9|1|A+ 1CW9|1|B5'-D(*CP*CP*AP*GP*(G47)P*CP*CP*TP*GP*G)-3'DNA DECAMER WITH AN ENGINEERED CROSSLINK IN THE MINOR GROOVEX-ray diffraction1.551999-10-14
1061CW9|1|C+ 1CW9|1|D5'-D(*CP*CP*AP*GP*(G47)P*CP*CP*TP*GP*G)-3'DNA DECAMER WITH AN ENGINEERED CROSSLINK IN THE MINOR GROOVEX-ray diffraction1.551999-10-14
107183D|1|ADNA (5'-D(*CP*CP*AP*(8OG)P*CP*GP*CP*TP*GP*G)-3')X-RAY STRUCTURE OF A DNA DECAMER CONTAINING 7, 8-DIHYDRO-8-OXOGUANINEX-ray diffraction1.61995-02-27
108213D|1|A+ 213D|1|BDNA (5'-D(*CP*CP*IP*GP*GP*CP*CP*(5CM)P*GP*G)-3')CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCIGGCCM5CGG) AT 1.6 ANGSTROMS SHOWING THE UNEXPECTED WOBBLE I.M5C BASE PAIRX-ray diffraction1.61996-01-31
1091DNZ|1|ADNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3')A-DNA DECAMER ACCGGCCGGT WITH MAGNESIUM BINDING SITESX-ray diffraction1.62000-04-10
110410D|1|A+ 410D|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(T38)P*AP*CP*GP*C)-3')DUPLEX [5'-D(GCGTA+TACGC)]2 WITH INCORPORATED 2'-O-ETHOXYMETHYLENE RIBONUCLEOSIDEX-ray diffraction1.61998-07-17
1111BD1|1|ADNA (5'-D(*CP*CP*AP*GP*GP*CP*CP*TP*GP*G)-3')CRYSTALLOGRAPHIC STUDY OF ONE TURN OF G/C-RICH B-DNAX-ray diffraction1.61990-01-15
112160D|1|A+ 160D|1|BDNA (5'-D(*CP*CP*CP*GP*GP*CP*CP*GP*GP*G)-3')HIGH RESOLUTION CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCCGGCCGGG): NOVEL INTERMOLECULAR BASE-PAIRED G*(G.C) TRIPLETSX-ray diffraction1.651994-05-18
113123D|1|A+ 123D|1|BDNA (5'-D(*CP*CP*AP*GP*GP*CP*(5CM)P*TP*GP*G)-3')DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLORX-ray diffraction1.71993-10-15
114137D|1|A+ 137D|1|BDNA (5'-D(*GP*CP*GP*GP*GP*CP*CP*CP*GP*C)-3')A-DNA DECAMER D(GCGGGCCCGC)-ORTHORHOMBIC CRYSTAL FORMX-ray diffraction1.71994-01-15
115122D|1|A+ 122D|1|BDNA (5'-D(*CP*CP*AP*GP*GP*CP*(5CM)P*TP*GP*G)-3')DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLORX-ray diffraction1.71993-10-15
116383D|1|A+ 383D|1|BDNA (5'-D(*CP*(5CM)P*GP*CP*(5CM)P*GP*GP*(5CM)P*GP*G)-3')Hydration and recognition of methylated CPG steps in DNAX-ray diffraction1.71998-04-08
117348D|1|ADNA (5'-D(*GP*AP*CP*CP*GP*CP*GP*GP*TP*C)-3')X-RAY CRYSTAL STRUCTURES OF THE DECAMER DGACCGCGGTC: LOW SALT CONCENTRATIONX-ray diffraction1.71997-10-09
118196D|1|A+ 196D|1|BDNA (5'-D(*CP*TP*CP*TP*CP*GP*AP*GP*AP*G)-3')CRYSTAL STRUCTURE OF C-T-C-T-C-G-A-G-A-G: IMPLICATIONS FOR THE STRUCTURE OF THE HOLLIDAY JUNCTIONX-ray diffraction1.71995-02-27
1191D56|1|A+ 1D56|1|BDNA (5'-D(*CP*GP*AP*TP*AP*TP*AP*TP*CP*G)-3')ALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-GX-ray diffraction1.71992-09-15
1201D02|1|C+ 1D02|1|DDNA (5'-D(*GP*CP*CP*AP*AP*TP*TP*GP*GP*C)-3')CRYSTAL STRUCTURE OF MUNI RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNAX-ray diffraction1.72000-03-08
1213KDE|1|A+ 3KDE|1|B5'-D(*GP*TP*TP*AP*AP*GP*(BRU)P*GP*GP*A)-3', 5'-D(*(BRU)P*CP*CP*AP*CP*TP*TP*AP*AP*C)-3'Crystal structure of the THAP domain from D. melanogaster P-element transposase in complex with its natural DNA binding siteX-ray diffraction1.742009-12-08
1222D25|1|A+ 2D25|1|BDNA (5'-D(*CP*CP*AP*GP*GP*CP*(5CM)P*TP*GP*G)-3')C-C-A-G-G-C-M5C-T-G-G; HELICAL FINE STRUCTURE, HYDRATION, AND COMPARISON WITH C-C-A-G-G-C-C-T-G-GX-ray diffraction1.751991-04-23
1232GWA|1|A+ 2GWA|1|B5'-D(*Tp*Cp*Gp*Gp*Tp*Ap*Cp*Cp*Gp*A)-3'Crystal Structure of a Complex Formed Between the DNA Holliday Junction and a Bis-Acridine Molecule.X-ray diffraction1.752006-06-06
1243JXZ|1|B+ 3JXZ|1|CDNA (5'-D(*TP*GP*GP*GP*(3DR)P*GP*GP*CP*TP*T)-3'), DNA (5'-D(*AP*AP*AP*GP*CP*CP*TP*CP*CP*C)-3')Bacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing an Abasic Site (across from T)X-ray diffraction1.752010-09-22
125138D|1|ADNA (5'-D(*GP*CP*GP*GP*GP*CP*CP*CP*GP*C)-3')A-DNA DECAMER D(GCGGGCCCGC)-HEXAGONAL CRYSTAL FORMX-ray diffraction1.81994-01-15
126396D|1|ADNA (5'-D(*GP*GP*CP*CP*GP*CP*GP*GP*CP*C)-3')synthetic constructCRYSTAL STRUCTURES OF TWO ISOMOPHOUS A-DNA DECAMERS D(GTACGCGTAC) AND D(GGCCGCGGCC)X-ray diffraction1.81998-05-01
127334D|1|A+ 334D|1|BDNA (5'-D(*CP*AP*TP*GP*GP*CP*CP*AP*TP*G)-3')DEFINING GC-SPECIFICITY IN THE MINOR GROOVE: SIDE-BY-SIDE BINDING OF THE DI-IMIDAZOLE LEXITROPSIN TO C-A-T-G-G-C-C-A-T-GX-ray diffraction1.81997-08-29
128307D|1|A+ 307D|1|BDNA (5'-D(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3')Structure of a DNA analog of the primer for HIV-1 RT second strand synthesisX-ray diffraction1.851997-01-27
1291JTL|1|A+ 1JTL|1|B5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'The crystal structure of d(GGCCAATTGG) Complexed with DistamycinX-ray diffraction1.852002-08-09
130307D|1|C+ 307D|1|DDNA (5'-D(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3')Structure of a DNA analog of the primer for HIV-1 RT second strand synthesisX-ray diffraction1.851997-01-27
131307D|1|E+ 307D|1|FDNA (5'-D(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3')Structure of a DNA analog of the primer for HIV-1 RT second strand synthesisX-ray diffraction1.851997-01-27
132432D|1|A+ 432D|1|BDNA (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3')D(GGCCAATTGG) COMPLEXED WITH DAPIX-ray diffraction1.891999-12-18
133212D|1|ADNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3')INFLUENCE OF COUNTER-IONS ON THE CRYSTAL STRUCTURES OF DNA DECAMERS: BINDING OF [CO(NH3)6]3+ AND BA2+ TO A-DNAX-ray diffraction1.91996-01-31
134349D|1|ADNA (5'-D(*GP*AP*CP*CP*GP*CP*GP*GP*TP*C)-3')X-RAY CRYSTAL STRUCTURES OF THE DECAMER DGACCGCGGTC: HIGH SALT CONCENTRATIONX-ray diffraction1.91997-10-09
135414D|1|A+ 414D|1|BDNA (5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3')5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3'X-ray diffraction1.91999-06-14
136221D|1|A+ 221D|1|BDNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3')INFLUENCE OF COUNTER-IONS ON THE CRYSTAL STRUCTURES OF DNA DECAMERS: BINDING OF [CO(NH3)6]3+ AND BA2+ TO A-DNAX-ray diffraction1.91996-01-31
137395D|1|ADNA (5'-D(*GP*TP*AP*CP*GP*CP*GP*TP*AP*C)-3')CRYSTAL STRUCTURES OF TWO ISOMORPHOUS A-DNA DECAMERS D(GTACGCGTAC) AND D(GGCCGCGGCC)X-ray diffraction1.91998-05-01
138158D|1|A+ 158D|1|BDNA (5'-D(*CP*CP*AP*AP*GP*CP*TP*TP*GP*G)-3')CRYSTALLOGRAPHIC ANALYSIS OF C-C-A-A-G-C-T-T-G-G AND ITS IMPLICATIONS FOR BENDING IN B-DNAX-ray diffraction1.91994-05-31
139260D|1|ADNA (5'-D(*GP*CP*AP*CP*GP*CP*GP*TP*GP*C)-3')CRYSTAL STRUCTURE OF THE SELF-COMPLEMENTARY 5'-PURINE START DECAMER D(GCACGCGTGC) IN THE A-DNA CONFORMATION-PART IIX-ray diffraction1.91996-06-27
140414D|1|C+ 414D|1|DDNA (5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3')5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3'X-ray diffraction1.91999-06-14
141411D|1|A+ 411D|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(T39)P*AP*CP*GP*C)-3')DUPLEX [5'-D(GCGTA+TACGC)]2 WITH INCORPORATED 2'-O-METHOXYETHYL RIBONUCLEOSIDEX-ray diffraction1.931998-07-17
1421BC8|1|A+ 1BC8|1|BDNA (5'-D(*TP*AP*CP*CP*GP*GP*AP*AP*GP*T)-3'), DNA (5'-D(*AP*AP*CP*TP*TP*CP*CP*GP*GP*T)-3')STRUCTURES OF SAP-1 BOUND TO DNA SEQUENCES FROM THE E74 AND C-FOS PROMOTERS PROVIDE INSIGHTS INTO HOW ETS PROTEINS DISCRIMINATE BETWEEN RELATED DNA TARGETSX-ray diffraction1.931998-12-01
143327D|1|ADNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*CP*GP*C)-3')CRYSTAL STRUCTURES OF D(GM5CGM5CGCGCGC)X-ray diffraction1.941997-05-22
1441D57|1|A+ 1D57|1|BDNA (5'-D(*CP*GP*AP*TP*AP*TP*AP*TP*CP*G)-3')ALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-GX-ray diffraction21992-09-15
145318D|1|A+ 318D|1|BDNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*(CBR)P*GP*G)-3')CRYSTAL STRUCTURES OF D(CCGGGCC(BR)5CGG)-HEXAGONAL FORMX-ray diffraction21997-05-22
1461WQY|1|A+ 1WQY|1|B5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3'X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solutionX-ray diffraction22005-06-21
147220D|1|ADNA (5'-D(*AP*CP*CP*CP*GP*CP*GP*GP*GP*T)-3')INFLUENCE OF COUNTER-IONS ON THE CRYSTAL STRUCTURES OF DNA DECAMERS: BINDING OF [CO(NH3)6]3+ AND BA2+ TO A-DNAX-ray diffraction21996-01-31
1481D13|1|ADNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3')MOLECULAR STRUCTURE OF AN A-DNA DECAMER D(ACCGGCCGGT)X-ray diffraction21990-10-15
149126D|1|A+ 126D|1|BDNA (5'-D(*CP*AP*TP*GP*GP*CP*CP*AP*TP*G)-3')CRYSTAL STRUCTURE OF CATGGCCATG AND ITS IMPLICATIONS FOR A-TRACT BENDING MODELSX-ray diffraction21993-10-15
1501SM5|1|A+ 1SM5|1|B5'-D(*GP*CP*(BRU)P*TP*AP*AP*TP*(BRU)P*CP*G)-3', 5'-D(*CP*GP*AP*AP*TP*TP*AP*AP*GP*C)-3'Crystal Structure of a DNA Decamer Containing a Thymine-dimerX-ray diffraction22004-05-25
151365D|1|A+ 365D|1|BDNA (5'-D(*CP*CP*AP*GP*GP*(CBR)P*CP*TP*GP*G)-3')STRUCTURAL BASIS FOR G C RECOGNITION IN THE DNA MINOR GROOVEX-ray diffraction21998-02-05
1521DA3|1|A+ 1DA3|1|BDNA (5'-D(*CP*GP*AP*TP*CP*GP*(6MA)P*TP*CP*G)-3')THE CRYSTAL STRUCTURE OF THE TRIGONAL DECAMER C-G-A-T-C-G-6MEA-T-C-G: A B-DNA HELIX WITH 10.6 BASE-PAIRS PER TURNX-ray diffraction21993-04-15
153240D|1|A+ 240D|1|BDNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3')EFFECT OF END BASE STEPS ON DNA FORM: CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCGGGCCCGG)X-ray diffraction21996-06-20
154272D|1|A+ 272D|1|BDNA (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3')PARALLEL AND ANTIPARALLEL (G.GC)2 TRIPLE HELIX FRAGMENTS IN A CRYSTAL STRUCTUREX-ray diffraction21996-09-20
1551D62|1|A5'-D(*CP*CP*AP*AP*IP*AP*TP*TP*GP*G)-3'THE STRUCTURE OF A /B-DNA$ DECAMER WITH AN I(SLASH)*A MISMATCH AND COMPARISON WITH THE G(SLASH)*A MISMATCHX-ray diffraction21993-07-15
1561SM5|1|C+ 1SM5|1|D5'-D(*GP*CP*(BRU)P*TP*AP*AP*TP*(BRU)P*CP*G)-3', 5'-D(*CP*GP*AP*AP*TP*TP*AP*AP*GP*C)-3'Crystal Structure of a DNA Decamer Containing a Thymine-dimerX-ray diffraction22004-05-25
1571JGG|1|C+ 1JGG|1|D5'-D(P*TP*AP*AP*TP*TP*GP*AP*AP*TP*T)-3', 5'-D(P*AP*AP*TP*TP*CP*AP*AP*TP*TP*A)-3'Even-skipped Homeodomain Complexed to AT-rich DNAX-ray diffraction22001-07-06

Release history

Release0.200.210.22
Date2011-06-042011-06-112011-06-18

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
1
3M7K|1|B+3M7K|1|C
Crystal structure of PacI-DNA Enzyme product complexX-RAY DIFFRACTION1.9210enzyme,hydrolase,nuclease
2
1Z8V|1|A+1Z8V|1|B
The Structure of d(GGCCAATTGG) Complexed with NetropsinX-RAY DIFFRACTION1.7510B-form double helix,double helix,structure
3
432D|1|A+432D|1|B
D(GGCCAATTGG) COMPLEXED WITH DAPIX-RAY DIFFRACTION1.8910B-form double helix,double helix,structure
4
1JTL|1|A+1JTL|1|B
The crystal structure of d(GGCCAATTGG) Complexed with DistamycinX-RAY DIFFRACTION1.8510B-form double helix,double helix,structure
5
272D|1|A+272D|1|B
PARALLEL AND ANTIPARALLEL (G.GC)2 TRIPLE HELIX FRAGMENTS IN A CRYSTAL STRUCTUREX-RAY DIFFRACTION210structure,triple helix
6
431D|1|A+431D|1|B
5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'X-RAY DIFFRACTION1.1510B-form double helix,double helix,structure
7
3JXZ|1|B+3JXZ|1|C
Bacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing an Abasic Site (across from T)X-RAY DIFFRACTION1.7510B-form double helix,double helix,structureenzyme,hydrolase
8
3JY1|1|B+3JY1|1|C
Bacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing an Abasic Site (across from C)X-RAY DIFFRACTION1.75410B-form double helix,double helix,structureenzyme,hydrolase
9
396D|1|A
CRYSTAL STRUCTURES OF TWO ISOMOPHOUS A-DNA DECAMERS D(GTACGCGTAC) AND D(GGCCGCGGCC)X-RAY DIFFRACTION1.810A-form double helix,double helix,structure
10
348D|1|A
X-RAY CRYSTAL STRUCTURES OF THE DECAMER DGACCGCGGTC: LOW SALT CONCENTRATIONX-RAY DIFFRACTION1.710A-form double helix,double helix,structure
11
349D|1|A
X-RAY CRYSTAL STRUCTURES OF THE DECAMER DGACCGCGGTC: HIGH SALT CONCENTRATIONX-RAY DIFFRACTION1.910A-form double helix,double helix,structure
12
2B1B|1|A+2B1B|1|B
5'-D(*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3' Zif268 binding siteX-RAY DIFFRACTION1.910A-form double helix,double helix,structure
13
3IFF|1|A+3IFF|1|B
2'-SeMe-A modified DNA decamerX-RAY DIFFRACTION1.7510double helix,structure
14
260D|1|A
CRYSTAL STRUCTURE OF THE SELF-COMPLEMENTARY 5'-PURINE START DECAMER D(GCACGCGTGC) IN THE A-DNA CONFORMATION-PART IIX-RAY DIFFRACTION1.910A-form double helix,double helix,structure
15
395D|1|A
CRYSTAL STRUCTURES OF TWO ISOMORPHOUS A-DNA DECAMERS D(GTACGCGTAC) AND D(GGCCGCGGCC)X-RAY DIFFRACTION1.910A-form double helix,double helix,structure
16
1DNZ|1|A
A-DNA DECAMER ACCGGCCGGT WITH MAGNESIUM BINDING SITESX-RAY DIFFRACTION1.610A-form double helix,double helix,structure
17
212D|1|A
INFLUENCE OF COUNTER-IONS ON THE CRYSTAL STRUCTURES OF DNA DECAMERS: BINDING OF [CO(NH3)6]3+ AND BA2+ TO A-DNAX-RAY DIFFRACTION1.910A-form double helix,double helix,structure
18
1D13|1|A
MOLECULAR STRUCTURE OF AN A-DNA DECAMER D(ACCGGCCGGT)X-RAY DIFFRACTION210A-form double helix,double helix,structure
19
138D|1|A
A-DNA DECAMER D(GCGGGCCCGC)-HEXAGONAL CRYSTAL FORMX-RAY DIFFRACTION1.810A-form double helix,double helix,structure
20
327D|1|A
CRYSTAL STRUCTURES OF D(GM5CGM5CGCGCGC)X-RAY DIFFRACTION1.9410A-form double helix,double helix,structure
21
220D|1|A
INFLUENCE OF COUNTER-IONS ON THE CRYSTAL STRUCTURES OF DNA DECAMERS: BINDING OF [CO(NH3)6]3+ AND BA2+ TO A-DNAX-RAY DIFFRACTION210A-form double helix,double helix,structure
22
1ZF1|1|A+1ZF1|1|B
CCC A-DNAX-RAY DIFFRACTION1.3510A-form double helix,double helix,structure
23
1ZF9|1|A+1ZF9|1|B
GGG Duplex A-DNAX-RAY DIFFRACTION1.3810A-form double helix,double helix,structure
24
2FIL|1|A+2FIL|1|B
Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-faT-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and 2'-Fluoroarabino-Thymidine (faT)X-RAY DIFFRACTION1.6910double helix,structure
25
2FIL|1|C+2FIL|1|D
Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-faT-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and 2'-Fluoroarabino-Thymidine (faT)X-RAY DIFFRACTION1.6910double helix,structure
26
2FIJ|1|A+2FIJ|1|B
Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-aU-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and Arabino-Uridine (aU)X-RAY DIFFRACTION1.1910double helix,structure
27
1XUX|1|A+1XUX|1|B
Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogsX-RAY DIFFRACTION1.310A-form double helix,double helix,structure
28
1ZF6|1|A+1ZF6|1|B
TGG DUPLEX A-DNAX-RAY DIFFRACTION1.510A-form double helix,double helix,structure
29
1M77|1|A
Near Atomic Resolution Crystal Structure of an A-DNA Decamer d(CCCGATCGGG): Cobalt Hexammine Interactions with A-DNAX-RAY DIFFRACTION1.2510A-form double helix,double helix,structure
30
1ZEY|1|A+1ZEY|1|B
CGG A-DNAX-RAY DIFFRACTION1.710double helix,structure
31
1XUX|1|C+1XUX|1|D
Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogsX-RAY DIFFRACTION1.310A-form double helix,double helix,structure
32
1PWF|1|A+1PWF|1|B
One Sugar Pucker Fits All: Pairing Versatility Despite Conformational Uniformity in TNAX-RAY DIFFRACTION1.1610double helix,structure
33
1Y8V|1|A+1Y8V|1|B
Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-propyl Thymidine (T*)X-RAY DIFFRACTION1.510A-form double helix,double helix,structure
34
411D|1|A+411D|1|B
DUPLEX [5'-D(GCGTA+TACGC)]2 WITH INCORPORATED 2'-O-METHOXYETHYL RIBONUCLEOSIDEX-RAY DIFFRACTION1.9310A-form double helix,double helix,structure
35
1XUW|1|A+1XUW|1|B
Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogsX-RAY DIFFRACTION1.2510A-form double helix,double helix,structure
36
1YBC|1|A+1YBC|1|B
Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(benzyloxy)ethyl] Thymidine (T*)X-RAY DIFFRACTION1.810A-form double helix,double helix,structure
37
2AXB|1|A+2AXB|1|B
Crystal Structure Analysis Of A 2-O-[2-(methoxy)ethyl]-2-thiothymidine Modified Oligodeoxynucleotide DuplexX-RAY DIFFRACTION1.6110A-form double helix,double helix,structure
38
1YB9|1|A+1YB9|1|B
Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(N,N-dimethylaminooxy)ethyl] Thymidine (T*)X-RAY DIFFRACTION1.6510A-form double helix,double helix,structure
39
1I0O|1|A+1I0O|1|B
1.6 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-3'-METHYLENEPHOSPHONATE THYMINE IN PLACE OF T6, HIGH K-SALTX-RAY DIFFRACTION210A-form double helix,double helix,structure
40
1I0J|1|A+1I0J|1|B
1.06 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-3'-METHYLENEPHOSPHONATE (T23) THYMINE IN PLACE OF T6, HIGH CS-SALTX-RAY DIFFRACTION1.0610A-form double helix,double helix,structure
41
1Y9F|1|A+1Y9F|1|B
Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-allyl Thymidine (T*)X-RAY DIFFRACTION1.610A-form double helix,double helix,structure
42
1Y9S|1|A+1Y9S|1|B
Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-propargyl Thymidine (T*)X-RAY DIFFRACTION1.5510A-form double helix,double helix,structure
43
1Y8L|1|A+1Y8L|1|B
Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(trifluoro)ethyl] Thymidine (T*)X-RAY DIFFRACTION1.510A-form double helix,double helix,structure
44
1Y7F|1|A+1Y7F|1|B
Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-[hydroxy(methyleneamino)oxy]ethyl] Thymidine (T*)X-RAY DIFFRACTION1.610A-form double helix,double helix,structure
45
1Y86|1|A+1Y86|1|B
Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(fluoro)ethyl] Thymidine (T*)X-RAY DIFFRACTION1.710A-form double helix,double helix,structure
46
1NZG|1|A+1NZG|1|B
Crystal structure of A-DNA decamer GCGTA(3ME)ACGC, with a modified 5-methyluridineX-RAY DIFFRACTION1.610A-form double helix,double helix,structure
47
1MLX|1|A+1MLX|1|B
Crystal Structure Analysis of a 2'-O-[2-(Methylthio)-ethyl]-Modified Oligodeoxynucleotide DuplexX-RAY DIFFRACTION1.2510A-form double helix,double helix,structure
48
3OZ3|1|A+3OZ3|1|B
Vinyl Carbocyclic LNAX-RAY DIFFRACTION1.5710A-form double helix,double helix,structure
49
410D|1|A+410D|1|B
DUPLEX [5'-D(GCGTA+TACGC)]2 WITH INCORPORATED 2'-O-ETHOXYMETHYLENE RIBONUCLEOSIDEX-RAY DIFFRACTION1.610A-form double helix,double helix,structure
50
3OZ5|1|A+3OZ5|1|B
S-Methyl Carbocyclic LNAX-RAY DIFFRACTION1.3610A-form double helix,double helix,structure
51
1MA8|1|A+1MA8|1|B
A-DNA decamer GCGTA(UMS)ACGC with incorporated 2'-methylseleno-uridineX-RAY DIFFRACTION1.310A-form double helix,double helix,structure
52
1R3G|1|A+1R3G|1|B
1.16A X-ray structure of the synthetic DNA fragment with the incorporated 2'-O-[(2-Guanidinium)ethyl]-5-methyluridine residuesX-RAY DIFFRACTION1.1610A-form double helix,double helix,structure
53
3EY2|1|A+3EY2|1|B
A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High ResolutionX-RAY DIFFRACTION1.0410A-form double helix,double helix,structure
54
1DPL|1|A+1DPL|1|B
A-DNA DECAMER GCGTA(T23)TACGC WITH INCORPORATED 2'-METHOXY-3'-METHYLENEPHOSPHATE-THYMIDINEX-RAY DIFFRACTION0.8310A-form double helix,double helix,structure
55
1KGK|1|A+1KGK|1|B
Direct Observation of a Cytosine Analog that Forms Five Hydrogen Bonds to Guanosine; Guanyl G-ClampX-RAY DIFFRACTION110A-form double helix,double helix,structure
56
1Y84|1|A+1Y84|1|B
Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(imidazolyl)ethyl] Thymidine (T*)X-RAY DIFFRACTION1.610A-form double helix,double helix,structure
57
1ZEX|1|A+1ZEX|1|B
CCG A-DNAX-RAY DIFFRACTION1.6510A-form double helix,double helix,structure
58
3OZ4|1|A+3OZ4|1|B
R-Methyl Carbocyclic LNAX-RAY DIFFRACTION1.5910A-form double helix,double helix,structure
59
1I5W|1|A+1I5W|1|B
A-DNA DECAMER GCGTA(TLN)ACGCX-RAY DIFFRACTION1.410A-form double helix,double helix,structure
60
440D|1|A+440D|1|B
HIGH RESOLUTION A-DNA CRYSTAL STRYCTURES OF D(AGGGGCCCCT): AN A-DNA MODEL OF POLY(DG).POLY(DC)X-RAY DIFFRACTION1.110A-form double helix,double helix,structure
61
160D|1|A+160D|1|B
HIGH RESOLUTION CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCCGGCCGGG): NOVEL INTERMOLECULAR BASE-PAIRED G*(G.C) TRIPLETSX-RAY DIFFRACTION1.6510A-form double helix,double helix,structure
62
221D|1|A+221D|1|B
INFLUENCE OF COUNTER-IONS ON THE CRYSTAL STRUCTURES OF DNA DECAMERS: BINDING OF [CO(NH3)6]3+ AND BA2+ TO A-DNAX-RAY DIFFRACTION1.910A-form double helix,double helix,structure
63
213D|1|A+213D|1|B
CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCIGGCCM5CGG) AT 1.6 ANGSTROMS SHOWING THE UNEXPECTED WOBBLE I.M5C BASE PAIRX-RAY DIFFRACTION1.610A-form double helix,double helix,structure
64
240D|1|A+240D|1|B
EFFECT OF END BASE STEPS ON DNA FORM: CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCGGGCCCGG)X-RAY DIFFRACTION210A-form double helix,double helix,structure
65
137D|1|A+137D|1|B
A-DNA DECAMER D(GCGGGCCCGC)-ORTHORHOMBIC CRYSTAL FORMX-RAY DIFFRACTION1.710A-form double helix,double helix,structure
66
414D|1|C+414D|1|D
5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3'X-RAY DIFFRACTION1.910double helix,structure
67
1ZFA|1|A+1ZFA|1|B
GGA Duplex A-DNAX-RAY DIFFRACTION1.5610A-form double helix,double helix,structure
68
383D|1|A+383D|1|B
Hydration and recognition of methylated CPG steps in DNAX-RAY DIFFRACTION1.710A-form double helix,double helix,structure
69
1ZF8|1|A+1ZF8|1|B
GGT Duplex A-DNAX-RAY DIFFRACTION1.4810A-form double helix,double helix,structure
70
414D|1|A+414D|1|B
5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3'X-RAY DIFFRACTION1.910double helix,structure
71
318D|1|A+318D|1|B
CRYSTAL STRUCTURES OF D(CCGGGCC(BR)5CGG)-HEXAGONAL FORMX-RAY DIFFRACTION210A-form double helix,double helix,structure
72
3HPO|1|C+3HPO|1|B
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus Y714S mutant bound to G:T mismatchX-RAY DIFFRACTION1.7510B-form double helix,double helix,structureenzyme,polymerase,transferase
73
2BDP|1|T+2BDP|1|P
CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNAX-RAY DIFFRACTION1.810B-form double helix,double helix,structureenzyme,polymerase,transferase
74
3PA0|1|A
Crystal Structure of Chiral Gamma-PNA with Complementary DNA Strand: Insight Into the Stability and Specificity of Recognition an Conformational PreorganizationX-RAY DIFFRACTION1.610NAKB_NA_annotationNAKB_protein_annotation
75
3PA0|1|B
Crystal Structure of Chiral Gamma-PNA with Complementary DNA Strand: Insight Into the Stability and Specificity of Recognition an Conformational PreorganizationX-RAY DIFFRACTION1.610NAKB_NA_annotationNAKB_protein_annotation
76
1NR8|1|A
The crystal structure of a D-Lysine-based chiral PNA-DNA duplexX-RAY DIFFRACTION1.6610NAKB_NA_annotationNAKB_protein_annotation
77
1S23|1|A
Crystal Structure Analysis of the B-DNA Decamer CGCAATTGCGX-RAY DIFFRACTION1.610B-form double helix,double helix,structure
78
473D|1|A+473D|1|B
NI2+/GUANINE INTERACTIONS AND NETROPSIN/GUANINE STACKING IN D(CGTATATACG)2X-RAY DIFFRACTION1.5810B-form double helix,double helix,structure
79
1WD0|1|B+1WD0|1|C
Crystal structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamersX-RAY DIFFRACTION1.910chromatin,nucleosome,structural
80
1SA3|1|C+1SA3|1|D
An asymmetric complex of restriction endonuclease MspI on its palindromic DNA recognition siteX-RAY DIFFRACTION1.9510B-form double helix,double helix,structureenzyme,hydrolase,nuclease
81
1SA3|1|E+1SA3|1|F
An asymmetric complex of restriction endonuclease MspI on its palindromic DNA recognition siteX-RAY DIFFRACTION1.9510B-form double helix,double helix,structureenzyme,hydrolase,nuclease
82
1SM5|1|C+1SM5|1|D
Crystal Structure of a DNA Decamer Containing a Thymine-dimerX-RAY DIFFRACTION210B-form double helix,double helix,structure
83
1SM5|1|A+1SM5|1|B
Crystal Structure of a DNA Decamer Containing a Thymine-dimerX-RAY DIFFRACTION210B-form double helix,double helix,structure
84
1BC8|1|A+1BC8|1|B
STRUCTURES OF SAP-1 BOUND TO DNA SEQUENCES FROM THE E74 AND C-FOS PROMOTERS PROVIDE INSIGHTS INTO HOW ETS PROTEINS DISCRIMINATE BETWEEN RELATED DNA TARGETSX-RAY DIFFRACTION1.9310B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
85
2VOA|1|C+2VOA|1|D
Structure of an AP Endonuclease from Archaeoglobus fulgidusX-RAY DIFFRACTION1.710double helix,structureenzyme,hydrolase,lyase,nuclease
86
3BDP|1|P+3BDP|1|T
DNA POLYMERASE I/DNA COMPLEXX-RAY DIFFRACTION1.910double helix,structureenzyme,polymerase,transferase
87
307D|1|A+307D|1|B
Structure of a DNA analog of the primer for HIV-1 RT second strand synthesisX-RAY DIFFRACTION1.8510B-form double helix,double helix,structure
88
307D|1|E+307D|1|F
Structure of a DNA analog of the primer for HIV-1 RT second strand synthesisX-RAY DIFFRACTION1.8510B-form double helix,double helix,structure
89
307D|1|C+307D|1|D
Structure of a DNA analog of the primer for HIV-1 RT second strand synthesisX-RAY DIFFRACTION1.8510B-form double helix,double helix,structure
90
1SK5|1|A+1SK5|1|B
The ultra-high resolution structure of d(CTTTTAAAAG)2: modulation of bending by T-A steps and its role in DNA recognitionX-RAY DIFFRACTION0.8910B-form double helix,double helix,structure
91
1ZFC|1|A+1ZFC|1|B
ATC Duplex B-DNAX-RAY DIFFRACTION210B-form double helix,double helix,structure
92
1IKK|1|A+1IKK|1|B
Intrinsic Bending and Deformability at the T-A step of CCTTTAAAGG: A Comparative Analysis of T-A and A-T steps within A-tractsX-RAY DIFFRACTION1.610B-form double helix,double helix,structure
93
1D49|1|A+1D49|1|B
THE STRUCTURE OF A B-DNA DECAMER WITH A CENTRAL T-A STEP: C-G-A-T-T-A-A-T-C-GX-RAY DIFFRACTION1.510B-form double helix,double helix,structure
94
1D23|1|A+1D23|1|B
THE STRUCTURE OF B-HELICAL C-G-A-T-C-G-A-T-C-G AND COMPARISON WITH C-C-A-A-C-G-T-T-G-G. THE EFFECT OF BASE PAIR REVERSALSX-RAY DIFFRACTION1.510B-form double helix,double helix,structure
95
1D57|1|A+1D57|1|B
ALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-GX-RAY DIFFRACTION210B-form double helix,double helix,structure
96
1D56|1|A+1D56|1|B
ALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-GX-RAY DIFFRACTION1.710B-form double helix,double helix,structure
97
1JGG|1|C+1JGG|1|D
Even-skipped Homeodomain Complexed to AT-rich DNAX-RAY DIFFRACTION210B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),homeodomain,regulatory,transcription
98
1DA3|1|A+1DA3|1|B
THE CRYSTAL STRUCTURE OF THE TRIGONAL DECAMER C-G-A-T-C-G-6MEA-T-C-G: A B-DNA HELIX WITH 10.6 BASE-PAIRS PER TURNX-RAY DIFFRACTION210B-form double helix,double helix,structure
99
196D|1|A+196D|1|B
CRYSTAL STRUCTURE OF C-T-C-T-C-G-A-G-A-G: IMPLICATIONS FOR THE STRUCTURE OF THE HOLLIDAY JUNCTIONX-RAY DIFFRACTION1.710B-form double helix,double helix,structure
100
1I6J|1|C+1I6J|1|B
CRYSTAL STRUCTURE OF A PSEUDO-16-MER DNA WITH STACKED GUANINES AND TWO G-A MISPAIRS COMPLEXED WITH THE N-TERMINAL FRAGMENT OF MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASEX-RAY DIFFRACTION210B-form double helix,double helix,structureenzyme,polymerase,transferase
101
334D|1|A+334D|1|B
DEFINING GC-SPECIFICITY IN THE MINOR GROOVE: SIDE-BY-SIDE BINDING OF THE DI-IMIDAZOLE LEXITROPSIN TO C-A-T-G-G-C-C-A-T-GX-RAY DIFFRACTION1.810B-form double helix,double helix,structure
102
126D|1|A+126D|1|B
CRYSTAL STRUCTURE OF CATGGCCATG AND ITS IMPLICATIONS FOR A-TRACT BENDING MODELSX-RAY DIFFRACTION210B-form double helix,double helix,structure
103
1ZF7|1|A+1ZF7|1|B
GAC Duplex B-DNAX-RAY DIFFRACTION1.0510B-form double helix,double helix,structure
104
1S1K|1|A
INFLUENCE OF GROOVE INTERACTIONS ON DNA HOLLIDAY JUNCTION FORMATIONX-RAY DIFFRACTION1.910B-form double helix,double helix,structure
105
1WQY|1|A+1WQY|1|B
X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solutionX-RAY DIFFRACTION210B-form double helix,double helix,structure
106
1ZF0|1|A+1ZF0|1|B
B-DNAX-RAY DIFFRACTION1.510B-form double helix,double helix,structure
107
1ZFB|1|A+1ZFB|1|B
GGC Duplex B-DNAX-RAY DIFFRACTION1.6510B-form double helix,double helix,structure
108
2WIW|1|C+2WIW|1|D
Crystal structures of Holliday junction resolvases from Archaeoglobus fulgidus bound to DNA substrateX-RAY DIFFRACTION1.810B-form double helix,double helix,structureenzyme,hydrolase,nuclease
109
1L4J|1|A+1L4J|1|B+1L4J|1|C+1L4J|1|D
Holliday Junction TCGGTACCGA with Na and Ca Binding Sites.X-RAY DIFFRACTION1.8510Holliday junction,structure
110
1ZFG|1|A+1ZFG|1|B
CTC Duplex B-DNAX-RAY DIFFRACTION1.7510double helix,structure
111
158D|1|A+158D|1|B
CRYSTALLOGRAPHIC ANALYSIS OF C-C-A-A-G-C-T-T-G-G AND ITS IMPLICATIONS FOR BENDING IN B-DNAX-RAY DIFFRACTION1.910B-form double helix,double helix,structure
112
2D25|1|A+2D25|1|B
C-C-A-G-G-C-M5C-T-G-G; HELICAL FINE STRUCTURE, HYDRATION, AND COMPARISON WITH C-C-A-G-G-C-C-T-G-GX-RAY DIFFRACTION1.7510B-form double helix,double helix,structure
113
122D|1|A+122D|1|B
DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLORX-RAY DIFFRACTION1.710B-form double helix,double helix,structure
114
123D|1|A+123D|1|B
DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLORX-RAY DIFFRACTION1.710B-form double helix,double helix,structure
115
1BD1|1|A
CRYSTALLOGRAPHIC STUDY OF ONE TURN OF G/C-RICH B-DNAX-RAY DIFFRACTION1.610B-form double helix,double helix,structure
116
183D|1|A
X-RAY STRUCTURE OF A DNA DECAMER CONTAINING 7, 8-DIHYDRO-8-OXOGUANINEX-RAY DIFFRACTION1.610B-form double helix,double helix,structure
117
1EN9|1|A
1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM.X-RAY DIFFRACTION0.98510B-form double helix,double helix,structure
118
3GGK|1|A
Locating monovalent cations in one turn of G/C rich B-DNAX-RAY DIFFRACTION0.8710B-form double helix,double helix,structure
119
3GGI|1|A
Locating monovalent cations in one turn of G/C rich B-DNAX-RAY DIFFRACTION0.9810B-form double helix,double helix,structure
120
1ZF5|1|A
GCT duplex B-DNAX-RAY DIFFRACTION0.9910B-form double helix,double helix,structure
121
1ENE|1|A
1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM.X-RAY DIFFRACTION0.98510B-form double helix,double helix,structure
122
3I5E|1|A
Allosteric Modulation of DNA by Small MoleculesX-RAY DIFFRACTION0.9810B-form double helix,double helix,structure
123
3DNB|1|A
HELIX GEOMETRY, HYDRATION, AND G.A MISMATCH IN A B-DNA DECAMERX-RAY DIFFRACTION1.310B-form double helix,double helix,feature,mispair,structure
124
1CW9|1|A+1CW9|1|B
DNA DECAMER WITH AN ENGINEERED CROSSLINK IN THE MINOR GROOVEX-RAY DIFFRACTION1.5510B-form double helix,double helix,structure
125
5DNB|1|A
STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-G-T-T-G-G AND COMPARISON WITH ISOMORPHOUS DECAMERS C-C-A-A-G-A-T-T-G-G AND C-C-A-G-G-C-C-T-G-GX-RAY DIFFRACTION1.410B-form double helix,double helix,structure
126
1D61|1|A
THE STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-I-T-T-G-G: MONOCLINIC FORMX-RAY DIFFRACTION1.310B-form double helix,double helix,structure
127
2OKS|1|A
X-ray Structure of a DNA Repair Substrate Containing an Alkyl Interstrand Crosslink at 1.65 ResolutionX-RAY DIFFRACTION1.6510B-form double helix,double helix,structure
128
1D62|1|A
THE STRUCTURE OF A /B-DNA$ DECAMER WITH AN I(SLASH)*A MISMATCH AND COMPARISON WITH THE G(SLASH)*A MISMATCHX-RAY DIFFRACTION210B-form double helix,double helix,structure
129
1EN8|1|A
1 A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUMX-RAY DIFFRACTION0.98510B-form double helix,double helix,structure
130
1CW9|1|C+1CW9|1|D
DNA DECAMER WITH AN ENGINEERED CROSSLINK IN THE MINOR GROOVEX-RAY DIFFRACTION1.5510B-form double helix,double helix,structure
131
365D|1|A+365D|1|B
STRUCTURAL BASIS FOR G C RECOGNITION IN THE DNA MINOR GROOVEX-RAY DIFFRACTION210B-form double helix,double helix,structure
132
3LDY|1|C+3LDY|1|B
An extraordinary mechanism of DNA perturbation exhibited by the rare-cutting HNH restriction endonuclease PacIX-RAY DIFFRACTION1.9710B-form double helix,double helix,feature,mispair,structureenzyme,hydrolase,nuclease
133
1D02|1|C+1D02|1|D
CRYSTAL STRUCTURE OF MUNI RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNAX-RAY DIFFRACTION1.710B-form double helix,double helix,structureenzyme,hydrolase,nuclease
134
3KDE|1|A+3KDE|1|B
Crystal structure of the THAP domain from D. melanogaster P-element transposase in complex with its natural DNA binding siteX-RAY DIFFRACTION1.7410B-form double helix,double helix,structureDNA replication/repair,enzyme,recombinase,regulatory
135
3OMJ|1|A+3OMJ|1|B
Structural Basis for Cyclic Py-Im Polyamide Allosteric Inhibition of Nuclear Receptor BindingX-RAY DIFFRACTION0.9510B-form double helix,double helix,structure
136
3I5L|1|A+3I5L|1|B
Allosteric Modulation of DNA by Small MoleculesX-RAY DIFFRACTION1.1810B-form double helix,double helix,structure
137
1ZFF|1|A
TTC Duplex B-DNAX-RAY DIFFRACTION0.9410double helix,structure
138
1P4Z|1|A
Effect of Sequence on the Conformational Geometry of DNA Holliday JunctionsX-RAY DIFFRACTION210B-form double helix,double helix,structure
139
1EN3|1|A
1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUMX-RAY DIFFRACTION0.98510B-form double helix,double helix,structure
140
2GWA|1|A+2GWA|1|B
Crystal Structure of a Complex Formed Between the DNA Holliday Junction and a Bis-Acridine Molecule.X-RAY DIFFRACTION1.7510Holliday junction,structure
141
3PBX|1|A+3PBX|1|B
Strontium bound to the sequence d(CCGGCGCCGG)X-RAY DIFFRACTION1.87910Holliday junction,structure
142
2ORH|1|A+2ORH|1|B
Directing Macromolecular Conformation Through Halogen BondsX-RAY DIFFRACTION1.910Holliday junction,structure
143
1ZEZ|1|A+1ZEZ|1|B
ACC Holliday JunctionX-RAY DIFFRACTION210Holliday junction,structure
144
1NVN|1|A+1NVN|1|B
Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 1.8 AX-RAY DIFFRACTION1.810Holliday junction,structure
145
1NT8|1|A+1NT8|1|B
Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 2.00 AX-RAY DIFFRACTION210Holliday junction,structure
146
1P4Y|1|A+1P4Y|1|B
Effect of Sequence on the Conformational Geometry of DNA Holliday JunctionsX-RAY DIFFRACTION1.710Holliday junction,structure
147
1ZF2|1|A+1ZF2|1|B
Four-stranded DNA Holliday Junction (CCC)X-RAY DIFFRACTION1.9510Holliday junction,structure
148
1NVY|1|A+1NVY|1|B
Strontium bound to the Holliday junction sequence d(TCGGTACCGA)4X-RAY DIFFRACTION1.510Holliday junction,structure
149
1M6G|1|A+1M6G|1|B
Structural Characterisation of the Holliday Junction TCGGTACCGAX-RAY DIFFRACTION1.65210Holliday junction,structure
150
1ZF3|1|A+1ZF3|1|B
ATC Four-stranded DNA Holliday JunctionX-RAY DIFFRACTION1.8410Holliday junction,structure
151
1ZF4|1|A+1ZF4|1|B
ATC Four-stranded DNA Holliday JunctionX-RAY DIFFRACTION1.6510Holliday junction,structure
152
2ORF|1|A+2ORF|1|B
Directing Macromolecular Conformation Through Halogen BondsX-RAY DIFFRACTION1.8510Holliday junction,structure
153
2ORG|1|A+2ORG|1|B
Directing Macromolecular Conformation Through Halogen BondsX-RAY DIFFRACTION210Holliday junction,structure
154
1NQS|1|A+1NQS|1|B
Structural Characterisation of the Holliday Junction formed by the sequence d(TCGGTACCGA) at 1.97 AX-RAY DIFFRACTION1.9710Holliday junction,structure
155
1L6B|1|A+1L6B|1|B
CRYSTAL STRUCTURE ANALYSIS OF THE ALL DNA HOLLIDAY JUNCTION STRUCTURE OF CCGGTACM5CGGX-RAY DIFFRACTION1.510Holliday junction,structure
156
3IGT|1|A+3IGT|1|B+3IGT|1|C+3IGT|1|D
A rare nucleotide base tautomer in the structure of an asymmetric DNA junctionX-RAY DIFFRACTION1.910Holliday junction,structure
157
1P54|1|A+1P54|1|B
Effect of Sequence on the Conformational Geometry of DNA Holliday JunctionsX-RAY DIFFRACTION1.910Holliday junction,structure

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