Equivalence class DNA_1.5_40903.5 Current
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 476D|1|A+ 476D|1|B (rep) | 5'-D(*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3' | CALCIUM FORM OF B-DNA UNDECAMER GCGAATTCGCG | X-ray diffraction | 1.3 | 1999-07-19 | ||||
2 | 3GOX|1|C+ 3GOX|1|D | 5'-(*DCP*DTP*DCP*DGP*DAP*DCP*DGP*DTP*DAP*DGP*DA)-3', 5'-(*DTP*DAP*DCP*DGP*DTP*DCP*DGP*DAP*DGP*DTP*DC)-3' | Crystal structure of the beta-beta-alpha-Me type II restriction endonuclease Hpy99I in the absence of EDTA | X-ray diffraction | 1.5 | 2009-04-28 |
Release history
Release | 0.19 |
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Date | 2011-05-28 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 476D|1|A+476D|1|B | CALCIUM FORM OF B-DNA UNDECAMER GCGAATTCGCG | X-RAY DIFFRACTION | 1.3 | 11 | B-form double helix,double helix,structure | |
2 | 3GOX|1|C+3GOX|1|D | Crystal structure of the beta-beta-alpha-Me type II restriction endonuclease Hpy99I in the absence of EDTA | X-RAY DIFFRACTION | 1.5 | 11 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease |
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