Equivalence class DNA_1.5_06871.3 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3BBB|1|G (rep) | DNA (5'-D(*AP*G)-3') | synthetic construct | Crystal structure of the NM23-H2 transcription factor complex with dinucleotide d(AG) | X-ray diffraction | 1.3 | 2008-09-23 | |||
| 2 | 3BBB|1|H | DNA (5'-D(*AP*G)-3') | synthetic construct | Crystal structure of the NM23-H2 transcription factor complex with dinucleotide d(AG) | X-ray diffraction | 1.3 | 2008-09-23 | |||
| 3 | 3BBB|1|I | DNA (5'-D(*AP*G)-3') | synthetic construct | Crystal structure of the NM23-H2 transcription factor complex with dinucleotide d(AG) | X-ray diffraction | 1.3 | 2008-09-23 | |||
| 4 | 3BBB|1|J | DNA (5'-D(*AP*G)-3') | synthetic construct | Crystal structure of the NM23-H2 transcription factor complex with dinucleotide d(AG) | X-ray diffraction | 1.3 | 2008-09-23 | |||
| 5 | 1DN8|1|A+ 1DN8|1|B | DNA (5'-D(*P*CP*GP*TP*AP*CP*GP*TP*AP*CP*G)-3') | STRUCTURE OF A Z-DNA WITH TWO DIFFERENT BACKBONE CHAIN CONFORMATIONS. STABILIZATION OF THE DECADEOXYOLIGONUCLEOTIDE D(CGTACGTACG) BY (CO(NH3)6)3+ BINDING TO THE GUANINE | X-ray diffraction | 1.5 | 1988-04-16 | ||||
| 6 | 1D53|1|A+ 1D53|1|B | DNA (5'-D(*CP*GP*CP*IP*CP*IP*CP*G)-3') | CRYSTAL STRUCTURE AT 1.5 ANGSTROMS RESOLUTION OF D(CGCICICG), AN OCTANUCLEOTIDE CONTAINING INOSINE, AND ITS COMPARISON WITH D(CGCG) AND D(CGCGCG) STRUCTURES | X-ray diffraction | 1.5 | 1993-04-13 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3BBB|1|I | Crystal structure of the NM23-H2 transcription factor complex with dinucleotide d(AG) | X-RAY DIFFRACTION | 1.3 | 2 | NAKB_NA_annotation | NAKB_protein_annotation |
| 2 | 3BBB|1|H | Crystal structure of the NM23-H2 transcription factor complex with dinucleotide d(AG) | X-RAY DIFFRACTION | 1.3 | 2 | NAKB_NA_annotation | NAKB_protein_annotation |
| 3 | 3BBB|1|J | Crystal structure of the NM23-H2 transcription factor complex with dinucleotide d(AG) | X-RAY DIFFRACTION | 1.3 | 2 | NAKB_NA_annotation | NAKB_protein_annotation |
| 4 | 3BBB|1|G | Crystal structure of the NM23-H2 transcription factor complex with dinucleotide d(AG) | X-RAY DIFFRACTION | 1.3 | 2 | NAKB_NA_annotation | NAKB_protein_annotation |
| 5 | 1DN8|1|A+1DN8|1|B | STRUCTURE OF A Z-DNA WITH TWO DIFFERENT BACKBONE CHAIN CONFORMATIONS. STABILIZATION OF THE DECADEOXYOLIGONUCLEOTIDE D(CGTACGTACG) BY (CO(NH3)6)3+ BINDING TO THE GUANINE | X-RAY DIFFRACTION | 1.5 | 2 | Z-form double helix,double helix,structure | |
| 6 | 1D53|1|A+1D53|1|B | CRYSTAL STRUCTURE AT 1.5 ANGSTROMS RESOLUTION OF D(CGCICICG), AN OCTANUCLEOTIDE CONTAINING INOSINE, AND ITS COMPARISON WITH D(CGCG) AND D(CGCGCG) STRUCTURES | X-RAY DIFFRACTION | 1.5 | 2 | Z-form double helix,double helix,structure |
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