Hairpin Loop Motif Atlas Release 4.8

#	Motif	Num Nts	Instances
1	HL_65265.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA (57) Other HL (8)	6	103
2	HL_65706.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 2 stacked bulged bases (35) T-loop with 2 bulged bases not stacked (4) Other HL (2)	7	49
3	HL_35028.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents UNCG (10) Other HL (4)	5	17
4	HL_88802.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	12
5	HL_61985.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents tRNA anticodon loop (7)	9	11
6	HL_09946.1 View exemplar Basepair signature: cWW-tSH-tSH-R-R History status: New id, no parents	8	10
7	HL_22101.1 View exemplar Basepair signature: cWW-R-R-tWH-R-R History status: New id, no parents	8	8
8	HL_76847.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	7
9	HL_05582.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R History status: New id, no parents	12	7
10	HL_85423.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	6
11	HL_65384.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA with one bulged base (5)	6	6
12	HL_09323.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 1 bulged base (2) Other HL (1)	7	6
13	HL_64326.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	5
14	HL_19237.1 View exemplar Basepair signature: cWW-cWW-R-cSS-cSS-R History status: New id, no parents	10	5
15	HL_70568.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
16	HL_82566.1 View exemplar Basepair signature: cWW-R-cSW-R-cSH History status: New id, no parents	9	5
17	HL_78028.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
18	HL_16769.1 View exemplar Basepair signature: cWW-R-cSS-R-R History status: New id, no parents	8	5
19	HL_59393.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	4
20	HL_00077.1 View exemplar Basepair signature: cWW-R-R-R-tSH-R-R History status: New id, no parents	10	4
21	HL_59958.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	4
22	HL_57025.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	4
23	HL_21515.1 View exemplar Basepair signature: cWW-cSH History status: New id, no parents tRNA Sec D-loop (4)	5	4
24	HL_18821.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	4
25	HL_15921.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	4
26	HL_39865.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents Other HL (1)	6	4
27	HL_14599.1 View exemplar Basepair signature: cWW-cWS-R-R History status: New id, no parents	6	4
28	HL_36175.1 View exemplar Basepair signature: cWW-tWW-R-R-R-R-R-R History status: New id, no parents	10	3
29	HL_77628.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
30	HL_67258.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
31	HL_57954.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	3
32	HL_55899.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
33	HL_92721.1 View exemplar Basepair signature: cWW-R-R-tSH-R History status: New id, no parents	8	3
34	HL_19263.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
35	HL_18802.1 View exemplar Basepair signature: cWW-R-R-cSH-cSH-R-R History status: New id, no parents	10	3
36	HL_72597.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
37	HL_96930.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
38	HL_48794.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
39	HL_29636.1 View exemplar Basepair signature: cWW-tSH-tHW-R-R-R-R History status: New id, no parents	10	3
40	HL_49303.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	7	3
41	HL_65119.1 View exemplar Basepair signature: cWW-R-cSH History status: New id, no parents	6	3
42	HL_41332.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
43	HL_30182.1 View exemplar Basepair signature: cWW-tSH-R History status: New id, no parents	5	2
44	HL_12598.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
45	HL_47398.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
46	HL_29603.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	2
47	HL_87745.1 View exemplar Basepair signature: cWW-tSH-cWS-cSH-R History status: New id, no parents	9	2
48	HL_10385.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
49	HL_87713.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	6	2
50	HL_19506.1 View exemplar Basepair signature: cWW-R-tSW-R-tWH-R-R-R History status: New id, no parents	11	2
51	HL_59913.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
52	HL_47506.1 View exemplar Basepair signature: cWW-cWW-R-tSH-R History status: New id, no parents	8	2
53	HL_64651.1 View exemplar Basepair signature: cWW-tSH-cWH-tSH-tWH-R-tHW-tHW-R-R History status: New id, no parents	14	2
54	HL_21811.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents	6	2
55	HL_62830.1 View exemplar Basepair signature: cWW-R-R-tHW-R-R-R-R-R-R-R History status: New id, no parents	13	2
56	HL_69152.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
57	HL_76914.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
58	HL_84795.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R History status: New id, no parents	8	2
59	HL_36577.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	2
60	HL_10545.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents	7	2
61	HL_49835.1 View exemplar Basepair signature: cWW-R-R-R-cSH History status: New id, no parents	8	2
62	HL_10531.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	2
63	HL_70566.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
64	HL_30812.1 View exemplar Basepair signature: cWW-tSH-cWS-cWS-R History status: New id, no parents tRNA Leu D-loop (2)	8	2
65	HL_40393.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
66	HL_80758.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
67	HL_47047.1 View exemplar Basepair signature: cWW-R-R-tWH-R History status: New id, no parents	7	2
68	HL_78419.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	7	2
69	HL_36340.1 View exemplar Basepair signature: cWW-cWS-tSW History status: New id, no parents	6	2
70	HL_13965.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
71	HL_28490.1 View exemplar Basepair signature: cWW-tWH-R-R History status: New id, no parents	6	2
72	HL_41689.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	2
73	HL_11205.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	2
74	HL_90751.1 View exemplar Basepair signature: cWW-tSH-tHH-tWW-R-R-R History status: New id, no parents	11	2
75	HL_23443.1 View exemplar Basepair signature: cWW-tSH-cWS-tSW-R-R-R-R-R History status: New id, no parents tRNA Leu D-loop (2)	13	2
76	HL_17238.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
77	HL_40348.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
78	HL_00286.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
79	HL_58593.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
80	HL_50436.1 View exemplar Basepair signature: cWW-tWW-R-R-R History status: New id, no parents	7	1
81	HL_39671.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
82	HL_91343.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
83	HL_94895.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	1
84	HL_60787.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
85	HL_42273.1 View exemplar Basepair signature: cWW-tSW-R-R-R-R History status: New id, no parents	8	1
86	HL_39848.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-R-R-R-R-R-R-R History status: New id, no parents	14	1
87	HL_63430.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	1
88	HL_56242.1 View exemplar Basepair signature: cWW-L-cWW-R-R-R-R-R History status: New id, no parents	11	1
89	HL_10182.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, no parents	5	1
90	HL_05053.1 View exemplar Basepair signature: cWW-R-tSH-tHS-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	18	1
91	HL_65762.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
92	HL_96781.1 View exemplar Basepair signature: cWW-R-R-R-tSW-R-R History status: New id, no parents	10	1
93	HL_31186.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
94	HL_60971.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	1
95	HL_41307.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
96	HL_99379.1 View exemplar Basepair signature: cWW-cWW-cWH-cWS-R History status: New id, no parents	9	1
97	HL_71938.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
98	HL_56206.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
99	HL_47910.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
100	HL_41047.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	1
101	HL_75203.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
102	HL_05302.1 View exemplar Basepair signature: cWW-cWS History status: New id, no parents	4	1
103	HL_43568.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
104	HL_54481.1 View exemplar Basepair signature: cWW-tSH-R-cWS-R-R-R History status: New id, no parents	10	1
105	HL_67200.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
106	HL_36399.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	1
107	HL_49189.1 View exemplar Basepair signature: cWW History status: New id, no parents	2	1
108	HL_38860.1 View exemplar Basepair signature: cWW-cWW-cWW-R-R-R History status: New id, no parents	10	1
109	HL_44716.1 View exemplar Basepair signature: cWW-cWW-R-R-R History status: New id, no parents	8	1
110	HL_58331.1 View exemplar Basepair signature: cWW-cSS-cSH History status: New id, no parents	7	1
111	HL_55818.1 View exemplar Basepair signature: cWW-tSH-tSH-bif-R-R-R-R-R-R-R History status: New id, no parents	15	1
112	HL_57575.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
113	HL_25544.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
114	HL_00355.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
115	HL_26981.1 View exemplar Basepair signature: cWW-bif-tSW History status: New id, no parents	6	1
116	HL_69382.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
117	HL_20079.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
118	HL_33794.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
119	HL_67682.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	1
120	HL_19772.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
121	HL_40793.1 View exemplar Basepair signature: cWW-cSH-R-R History status: New id, no parents	7	1
122	HL_93604.1 View exemplar Basepair signature: cWW-R-tSW-R-R History status: New id, no parents	8	1
123	HL_98765.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
124	HL_52513.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R History status: New id, no parents	8	1
125	HL_35530.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R-R-R-R History status: New id, no parents	12	1
126	HL_54388.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
127	HL_20436.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
128	HL_72010.1 View exemplar Basepair signature: cWW-tWH-tHH-R History status: New id, no parents	7	1
129	HL_11990.1 View exemplar Basepair signature: cWW-cWW-R-cSW-R-cSH History status: New id, no parents	11	1
130	HL_21448.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R History status: New id, no parents	8	1
131	HL_34454.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
132	HL_95772.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
133	HL_29694.1 View exemplar Basepair signature: cWW-tHW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
134	HL_08682.1 View exemplar Basepair signature: cWW-cWW-tSH-R History status: New id, no parents	7	1
135	HL_28583.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
136	HL_41888.1 View exemplar Basepair signature: cWW-cWH-R History status: New id, no parents	5	1
137	HL_44110.1 View exemplar Basepair signature: cWW-R-R-cWS-cSH-R-R History status: New id, no parents	11	1
138	HL_19107.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
139	HL_77314.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
140	HL_05822.1 View exemplar Basepair signature: cWW-R-R-R-R-tHW-R-R-R-R-R History status: New id, no parents	13	1
141	HL_52846.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
142	HL_33198.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
143	HL_65264.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
144	HL_95945.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
145	HL_03001.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
146	HL_69275.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
147	HL_73804.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	1
148	HL_95670.1 View exemplar Basepair signature: cWW-bif-R-R-R History status: New id, no parents	7	1
149	HL_51857.1 View exemplar Basepair signature: cWW-tSW History status: New id, no parents	4	1
150	HL_00862.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
151	HL_34120.1 View exemplar Basepair signature: cWW-cWS-R History status: New id, no parents tRNA Met D-loop (1)	5	1
152	HL_96521.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R History status: New id, no parents	11	1
153	HL_81171.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R-R-R-R History status: New id, no parents	11	1
154	HL_16976.1 View exemplar Basepair signature: cWW-R-R-R-cSS-R-cSW-R-R-R-R-R History status: New id, no parents	16	1
155	HL_46715.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
156	HL_60638.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
157	HL_27086.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
158	HL_44006.1 View exemplar Basepair signature: cWW-cWW-R-cSH-R History status: New id, no parents	8	1
159	HL_90130.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
160	HL_81676.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
161	HL_10786.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
162	HL_88528.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
163	HL_30618.1 View exemplar Basepair signature: cWW-tHH-cSH-R-R History status: New id, no parents	8	1
164	HL_45765.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
165	HL_02726.1 View exemplar Basepair signature: cWW-cWW-tWH-R-R-R History status: New id, no parents	9	1
166	HL_77295.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
167	HL_66195.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
168	HL_08436.1 View exemplar Basepair signature: cWW-tSH-tHS-R-R History status: New id, no parents	8	1
169	HL_73573.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	1
170	HL_99201.1 View exemplar Basepair signature: cWW-tSH-tHH-R-R-R-R-R History status: New id, no parents	11	1

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Nucleotide numbers

New id, no parents 170;

Hairpin Loop Motif Atlas Release 4.8 Download Csv Json

Hairpin Loop Motif Atlas Release 4.8

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