Hairpin Loop Motif Atlas Release 4.3

#	Motif	Num Nts	Instances
1	HL_23047.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA (57) Other HL (8)	6	103
2	HL_78363.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 2 stacked bulged bases (35) T-loop with 2 bulged bases not stacked (4) Other HL (2)	7	49
3	HL_29189.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents UNCG (10) Other HL (4)	5	17
4	HL_44688.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	12
5	HL_00095.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents tRNA anticodon loop (7)	9	11
6	HL_40386.1 View exemplar Basepair signature: cWW-tSH-tSH-R-R History status: New id, no parents	8	10
7	HL_04903.1 View exemplar Basepair signature: cWW-R-R-tWH-R-R History status: New id, no parents	8	8
8	HL_17708.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	7
9	HL_86111.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R History status: New id, no parents	12	7
10	HL_75907.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	6
11	HL_58079.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 1 bulged base (2) Other HL (1)	7	6
12	HL_40154.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA with one bulged base (5)	6	6
13	HL_86030.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	5
14	HL_26538.1 View exemplar Basepair signature: cWW-cWW-R-cSS-cSS-R History status: New id, no parents	10	5
15	HL_41132.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
16	HL_69639.1 View exemplar Basepair signature: cWW-R-cSW-R-cSH History status: New id, no parents	9	5
17	HL_22280.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
18	HL_21436.1 View exemplar Basepair signature: cWW-R-cSS-R-R History status: New id, no parents	8	5
19	HL_17076.1 View exemplar Basepair signature: cWW-R-R-R-tSH-R-R History status: New id, no parents	10	4
20	HL_23800.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	4
21	HL_98643.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	4
22	HL_26132.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	4
23	HL_28469.1 View exemplar Basepair signature: cWW-cSH History status: New id, no parents tRNA Sec D-loop (4)	5	4
24	HL_79166.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	4
25	HL_44196.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	4
26	HL_98607.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents Other HL (1)	6	4
27	HL_43529.1 View exemplar Basepair signature: cWW-cWS-R-R History status: New id, no parents	6	4
28	HL_72136.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
29	HL_20980.1 View exemplar Basepair signature: cWW-R-cSH History status: New id, no parents	6	3
30	HL_78060.1 View exemplar Basepair signature: cWW-tWW-R-R-R-R-R-R History status: New id, no parents	10	3
31	HL_22330.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
32	HL_60212.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
33	HL_24754.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	3
34	HL_43302.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
35	HL_73184.1 View exemplar Basepair signature: cWW-R-R-tSH-R History status: New id, no parents	8	3
36	HL_51604.1 View exemplar Basepair signature: cWW-R-R-cSH-cSH-R-R History status: New id, no parents	10	3
37	HL_44914.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
38	HL_96869.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
39	HL_67719.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
40	HL_94387.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
41	HL_74984.1 View exemplar Basepair signature: cWW-tSH-tHW-R-R-R-R History status: New id, no parents	10	3
42	HL_83225.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	3
43	HL_66260.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
44	HL_41413.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
45	HL_32161.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
46	HL_50661.1 View exemplar Basepair signature: cWW-tSH-R History status: New id, no parents	5	2
47	HL_06166.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
48	HL_88997.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
49	HL_79949.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	2
50	HL_00736.1 View exemplar Basepair signature: cWW-tSH-cWS-cSH-R History status: New id, no parents	9	2
51	HL_21791.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
52	HL_74911.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	6	2
53	HL_47168.1 View exemplar Basepair signature: cWW-R-tSW-R-tWH-R-R-R History status: New id, no parents	11	2
54	HL_47232.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
55	HL_51968.1 View exemplar Basepair signature: cWW-tSH-cWH-tSH-tWH-R-tHW-tHW-R-R History status: New id, no parents	14	2
56	HL_56971.1 View exemplar Basepair signature: cWW-cWW-R-tSH-R History status: New id, no parents	8	2
57	HL_95400.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents	6	2
58	HL_75889.1 View exemplar Basepair signature: cWW-R-R-tHW-R-R-R-R-R-R-R History status: New id, no parents	13	2
59	HL_85970.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
60	HL_23878.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R History status: New id, no parents	8	2
61	HL_39721.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
62	HL_68322.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	2
63	HL_18746.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents	7	2
64	HL_91702.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	2
65	HL_17127.1 View exemplar Basepair signature: cWW-R-R-R-cSH History status: New id, no parents	8	2
66	HL_62304.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
67	HL_46185.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
68	HL_11298.1 View exemplar Basepair signature: cWW-R-R-tWH-R History status: New id, no parents	7	2
69	HL_53599.1 View exemplar Basepair signature: cWW-tSH-cWS-cWS-R History status: New id, no parents tRNA Leu D-loop (2)	8	2
70	HL_75780.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
71	HL_08810.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	7	2
72	HL_32427.1 View exemplar Basepair signature: cWW-cWS-tSW History status: New id, no parents	6	2
73	HL_92257.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
74	HL_80218.1 View exemplar Basepair signature: cWW-tWH-R-R History status: New id, no parents	6	2
75	HL_82919.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	2
76	HL_23668.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	2
77	HL_23875.1 View exemplar Basepair signature: cWW-tSH-tHH-tWW-R-R-R History status: New id, no parents	11	2
78	HL_19064.1 View exemplar Basepair signature: cWW-tSH-cWS-tSW-R-R-R-R-R History status: New id, no parents tRNA Leu D-loop (2)	13	2
79	HL_61109.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
80	HL_08642.1 View exemplar Basepair signature: cWW-tSH-tHH-R-R-R-R-R History status: New id, no parents	11	1
81	HL_44098.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
82	HL_57397.1 View exemplar Basepair signature: cWW-tSH-tHS-R-R History status: New id, no parents	8	1
83	HL_97182.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	1
84	HL_33767.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
85	HL_61901.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
86	HL_96673.1 View exemplar Basepair signature: cWW-tWW-R-R-R History status: New id, no parents	7	1
87	HL_61124.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
88	HL_51672.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
89	HL_19325.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	1
90	HL_62202.1 View exemplar Basepair signature: cWW-L-cWW-R-R-R-R-R History status: New id, no parents	11	1
91	HL_24030.1 View exemplar Basepair signature: cWW-tSW-R-R-R-R History status: New id, no parents	8	1
92	HL_24605.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-R-R-R-R-R-R-R History status: New id, no parents	14	1
93	HL_77894.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	1
94	HL_10257.1 View exemplar Basepair signature: cWW-R-R-R-tSW-R-R History status: New id, no parents	10	1
95	HL_42724.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, no parents	5	1
96	HL_10569.1 View exemplar Basepair signature: cWW-R-tSH-tHS-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	18	1
97	HL_98800.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
98	HL_93308.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
99	HL_12689.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	1
100	HL_82192.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
101	HL_37482.1 View exemplar Basepair signature: cWW-cWW-cWH-cWS-R History status: New id, no parents	9	1
102	HL_02617.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
103	HL_43355.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
104	HL_94528.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
105	HL_97488.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
106	HL_88808.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	1
107	HL_89409.1 View exemplar Basepair signature: cWW-cWS History status: New id, no parents	4	1
108	HL_47146.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
109	HL_99364.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	1
110	HL_06457.1 View exemplar Basepair signature: cWW-tSH-R-cWS-R-R-R History status: New id, no parents	10	1
111	HL_30361.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
112	HL_97037.1 View exemplar Basepair signature: cWW-cSS-cSH History status: New id, no parents	7	1
113	HL_45986.1 View exemplar Basepair signature: cWW History status: New id, no parents	2	1
114	HL_30543.1 View exemplar Basepair signature: cWW-cWW-cWW-R-R-R History status: New id, no parents	10	1
115	HL_22891.1 View exemplar Basepair signature: cWW-cWW-R-R-R History status: New id, no parents	8	1
116	HL_51517.1 View exemplar Basepair signature: cWW-tSH-tSH-bif-R-R-R-R-R-R-R History status: New id, no parents	15	1
117	HL_74140.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
118	HL_22678.1 View exemplar Basepair signature: cWW-bif-tSW History status: New id, no parents	6	1
119	HL_57377.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
120	HL_03390.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
121	HL_79746.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	1
122	HL_51824.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
123	HL_27522.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
124	HL_86621.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
125	HL_75830.1 View exemplar Basepair signature: cWW-cSH-R-R History status: New id, no parents	7	1
126	HL_16777.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
127	HL_10438.1 View exemplar Basepair signature: cWW-R-tSW-R-R History status: New id, no parents	8	1
128	HL_02929.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
129	HL_57875.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R History status: New id, no parents	8	1
130	HL_49294.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R-R-R-R History status: New id, no parents	12	1
131	HL_04326.1 View exemplar Basepair signature: cWW-tWH-tHH-R History status: New id, no parents	7	1
132	HL_99205.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
133	HL_68395.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
134	HL_88370.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
135	HL_55612.1 View exemplar Basepair signature: cWW-cWW-R-cSW-R-cSH History status: New id, no parents	11	1
136	HL_86163.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R History status: New id, no parents	8	1
137	HL_14557.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
138	HL_75512.1 View exemplar Basepair signature: cWW-tHW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
139	HL_73676.1 View exemplar Basepair signature: cWW-cWW-tSH-R History status: New id, no parents	7	1
140	HL_00997.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
141	HL_34203.1 View exemplar Basepair signature: cWW-cWH-R History status: New id, no parents	5	1
142	HL_38280.1 View exemplar Basepair signature: cWW-R-R-cWS-cSH-R-R History status: New id, no parents	11	1
143	HL_28300.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
144	HL_54372.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
145	HL_44179.1 View exemplar Basepair signature: cWW-R-R-R-R-tHW-R-R-R-R-R History status: New id, no parents	13	1
146	HL_51339.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
147	HL_56305.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
148	HL_31315.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
149	HL_75902.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
150	HL_48465.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
151	HL_25408.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
152	HL_36310.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
153	HL_83498.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	1
154	HL_65718.1 View exemplar Basepair signature: cWW-bif-R-R-R History status: New id, no parents	7	1
155	HL_17298.1 View exemplar Basepair signature: cWW-tSW History status: New id, no parents	4	1
156	HL_70920.1 View exemplar Basepair signature: cWW-cWS-R History status: New id, no parents tRNA Met D-loop (1)	5	1
157	HL_26109.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R History status: New id, no parents	11	1
158	HL_28270.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R-R-R-R History status: New id, no parents	11	1
159	HL_49126.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
160	HL_17347.1 View exemplar Basepair signature: cWW-R-R-R-cSS-R-cSW-R-R-R-R-R History status: New id, no parents	16	1
161	HL_91999.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
162	HL_92827.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
163	HL_03544.1 View exemplar Basepair signature: cWW-cWW-R-cSH-R History status: New id, no parents	8	1
164	HL_00315.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
165	HL_07850.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
166	HL_75194.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
167	HL_75929.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
168	HL_56857.1 View exemplar Basepair signature: cWW-tHH-cSH-R-R History status: New id, no parents	8	1
169	HL_04811.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
170	HL_37727.1 View exemplar Basepair signature: cWW-cWW-tWH-R-R-R History status: New id, no parents	9	1

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Nucleotide numbers

New id, no parents 170;

Hairpin Loop Motif Atlas Release 4.3 Download Csv Json

Hairpin Loop Motif Atlas Release 4.3

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