Hairpin Loop Motif Atlas Release 4.24

#	Motif	Num Nts	Instances
1	HL_99098.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA (57) Other HL (8)	6	103
2	HL_76442.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 2 stacked bulged bases (35) T-loop with 2 bulged bases not stacked (4) Other HL (2)	7	49
3	HL_11448.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents UNCG (10) Other HL (4)	5	17
4	HL_73621.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	12
5	HL_13507.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents tRNA anticodon loop (7)	9	11
6	HL_95570.1 View exemplar Basepair signature: cWW-tSH-tSH-R-R History status: New id, no parents	8	10
7	HL_15797.1 View exemplar Basepair signature: cWW-R-R-tWH-R-R History status: New id, no parents	8	8
8	HL_98997.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	7
9	HL_17666.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R History status: New id, no parents	12	7
10	HL_24723.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	6
11	HL_13915.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 1 bulged base (2) Other HL (1)	7	6
12	HL_92579.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA with one bulged base (5)	6	6
13	HL_26157.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
14	HL_49654.1 View exemplar Basepair signature: cWW-R-cSS-R-R History status: New id, no parents	8	5
15	HL_02185.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	5
16	HL_74942.1 View exemplar Basepair signature: cWW-cWW-R-cSS-cSS-R History status: New id, no parents	10	5
17	HL_50750.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
18	HL_65010.1 View exemplar Basepair signature: cWW-R-cSW-R-cSH History status: New id, no parents	9	5
19	HL_88138.1 View exemplar Basepair signature: cWW-cWS-R-R History status: New id, no parents	6	4
20	HL_62060.1 View exemplar Basepair signature: cWW-R-R-R-tSH-R-R History status: New id, no parents	10	4
21	HL_54225.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	4
22	HL_97598.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	4
23	HL_06020.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	4
24	HL_53460.1 View exemplar Basepair signature: cWW-cSH History status: New id, no parents tRNA Sec D-loop (4)	5	4
25	HL_94118.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	4
26	HL_68842.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	4
27	HL_77274.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents Other HL (1)	6	4
28	HL_82362.1 View exemplar Basepair signature: cWW-R-R-cSH-cSH-R-R History status: New id, no parents	10	3
29	HL_14174.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
30	HL_99817.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
31	HL_45228.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
32	HL_17296.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
33	HL_19271.1 View exemplar Basepair signature: cWW-tSH-tHW-R-R-R-R History status: New id, no parents	10	3
34	HL_14158.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	3
35	HL_33236.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
36	HL_08171.1 View exemplar Basepair signature: cWW-R-cSH History status: New id, no parents	6	3
37	HL_00633.1 View exemplar Basepair signature: cWW-tWW-R-R-R-R-R-R History status: New id, no parents	10	3
38	HL_29177.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
39	HL_47637.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
40	HL_07130.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	3
41	HL_02472.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
42	HL_22251.1 View exemplar Basepair signature: cWW-R-R-tSH-R History status: New id, no parents	8	3
43	HL_55215.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
44	HL_64487.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
45	HL_14567.1 View exemplar Basepair signature: cWW-R-R-tWH-R History status: New id, no parents	7	2
46	HL_21005.1 View exemplar Basepair signature: cWW-tSH-cWS-cWS-R History status: New id, no parents tRNA Leu D-loop (2)	8	2
47	HL_95432.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
48	HL_83235.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	7	2
49	HL_37528.1 View exemplar Basepair signature: cWW-cWS-tSW History status: New id, no parents	6	2
50	HL_09486.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
51	HL_97058.1 View exemplar Basepair signature: cWW-tWH-R-R History status: New id, no parents	6	2
52	HL_66024.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	2
53	HL_16366.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	2
54	HL_76549.1 View exemplar Basepair signature: cWW-tSH-tHH-tWW-R-R-R History status: New id, no parents	11	2
55	HL_95279.1 View exemplar Basepair signature: cWW-tSH-cWS-tSW-R-R-R-R-R History status: New id, no parents tRNA Leu D-loop (2)	13	2
56	HL_53362.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
57	HL_73994.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
58	HL_26452.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
59	HL_01868.1 View exemplar Basepair signature: cWW-tSH-R History status: New id, no parents	5	2
60	HL_65263.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
61	HL_69885.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
62	HL_85439.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	2
63	HL_52271.1 View exemplar Basepair signature: cWW-tSH-cWS-cSH-R History status: New id, no parents	9	2
64	HL_68057.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
65	HL_14497.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	6	2
66	HL_13055.1 View exemplar Basepair signature: cWW-R-tSW-R-tWH-R-R-R History status: New id, no parents	11	2
67	HL_82120.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
68	HL_24036.1 View exemplar Basepair signature: cWW-tSH-cWH-tSH-tWH-R-tHW-tHW-R-R History status: New id, no parents	14	2
69	HL_18851.1 View exemplar Basepair signature: cWW-cWW-R-tSH-R History status: New id, no parents	8	2
70	HL_84315.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents	6	2
71	HL_35965.1 View exemplar Basepair signature: cWW-R-R-tHW-R-R-R-R-R-R-R History status: New id, no parents	13	2
72	HL_16143.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
73	HL_29372.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R History status: New id, no parents	8	2
74	HL_76957.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
75	HL_82181.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	2
76	HL_77951.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents	7	2
77	HL_64536.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	2
78	HL_97209.1 View exemplar Basepair signature: cWW-R-R-R-cSH History status: New id, no parents	8	2
79	HL_31018.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
80	HL_76743.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
81	HL_13575.1 View exemplar Basepair signature: cWW-R-R-R-R-tHW-R-R-R-R-R History status: New id, no parents	13	1
82	HL_63037.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
83	HL_57853.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
84	HL_13739.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
85	HL_93878.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
86	HL_20109.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
87	HL_10291.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
88	HL_75805.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
89	HL_56657.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	1
90	HL_87762.1 View exemplar Basepair signature: cWW-bif-R-R-R History status: New id, no parents	7	1
91	HL_29855.1 View exemplar Basepair signature: cWW-tSW History status: New id, no parents	4	1
92	HL_91808.1 View exemplar Basepair signature: cWW-cWS-R History status: New id, no parents tRNA Met D-loop (1)	5	1
93	HL_27186.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R History status: New id, no parents	11	1
94	HL_70847.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R-R-R-R History status: New id, no parents	11	1
95	HL_67098.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
96	HL_23847.1 View exemplar Basepair signature: cWW-R-R-R-cSS-R-cSW-R-R-R-R-R History status: New id, no parents	16	1
97	HL_27983.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
98	HL_75111.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
99	HL_40430.1 View exemplar Basepair signature: cWW-cWW-R-cSH-R History status: New id, no parents	8	1
100	HL_88638.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
101	HL_91954.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
102	HL_83019.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
103	HL_57421.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
104	HL_29838.1 View exemplar Basepair signature: cWW-tHH-cSH-R-R History status: New id, no parents	8	1
105	HL_27626.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
106	HL_70146.1 View exemplar Basepair signature: cWW-cWW-tWH-R-R-R History status: New id, no parents	9	1
107	HL_82284.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
108	HL_16026.1 View exemplar Basepair signature: cWW-tSH-tHH-R-R-R-R-R History status: New id, no parents	11	1
109	HL_76605.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
110	HL_42102.1 View exemplar Basepair signature: cWW-tSH-tHS-R-R History status: New id, no parents	8	1
111	HL_56900.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	1
112	HL_19965.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
113	HL_15370.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
114	HL_35228.1 View exemplar Basepair signature: cWW-tWW-R-R-R History status: New id, no parents	7	1
115	HL_24330.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
116	HL_97829.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
117	HL_74095.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	1
118	HL_18299.1 View exemplar Basepair signature: cWW-L-cWW-R-R-R-R-R History status: New id, no parents	11	1
119	HL_71729.1 View exemplar Basepair signature: cWW-tSW-R-R-R-R History status: New id, no parents	8	1
120	HL_31164.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-R-R-R-R-R-R-R History status: New id, no parents	14	1
121	HL_57824.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	1
122	HL_89734.1 View exemplar Basepair signature: cWW-R-R-R-tSW-R-R History status: New id, no parents	10	1
123	HL_04272.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, no parents	5	1
124	HL_84485.1 View exemplar Basepair signature: cWW-R-tSH-tHS-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	18	1
125	HL_98812.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
126	HL_80877.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
127	HL_75130.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	1
128	HL_10372.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
129	HL_28068.1 View exemplar Basepair signature: cWW-cWW-cWH-cWS-R History status: New id, no parents	9	1
130	HL_05420.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
131	HL_11505.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
132	HL_64126.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
133	HL_40759.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
134	HL_81472.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	1
135	HL_04014.1 View exemplar Basepair signature: cWW-cWS History status: New id, no parents	4	1
136	HL_76718.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
137	HL_78109.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	1
138	HL_64757.1 View exemplar Basepair signature: cWW-tSH-R-cWS-R-R-R History status: New id, no parents	10	1
139	HL_39656.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
140	HL_61760.1 View exemplar Basepair signature: cWW-cSS-cSH History status: New id, no parents	7	1
141	HL_89427.1 View exemplar Basepair signature: cWW History status: New id, no parents	2	1
142	HL_05716.1 View exemplar Basepair signature: cWW-cWW-cWW-R-R-R History status: New id, no parents	10	1
143	HL_82933.1 View exemplar Basepair signature: cWW-cWW-R-R-R History status: New id, no parents	8	1
144	HL_52662.1 View exemplar Basepair signature: cWW-tSH-tSH-bif-R-R-R-R-R-R-R History status: New id, no parents	15	1
145	HL_50495.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
146	HL_16420.1 View exemplar Basepair signature: cWW-bif-tSW History status: New id, no parents	6	1
147	HL_35857.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
148	HL_01368.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
149	HL_35556.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	1
150	HL_46872.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
151	HL_67459.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
152	HL_27191.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
153	HL_39395.1 View exemplar Basepair signature: cWW-cSH-R-R History status: New id, no parents	7	1
154	HL_33508.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
155	HL_39379.1 View exemplar Basepair signature: cWW-R-tSW-R-R History status: New id, no parents	8	1
156	HL_26625.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
157	HL_79448.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R History status: New id, no parents	8	1
158	HL_71555.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R-R-R-R History status: New id, no parents	12	1
159	HL_17434.1 View exemplar Basepair signature: cWW-tWH-tHH-R History status: New id, no parents	7	1
160	HL_49742.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
161	HL_48157.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
162	HL_09569.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
163	HL_81097.1 View exemplar Basepair signature: cWW-cWW-R-cSW-R-cSH History status: New id, no parents	11	1
164	HL_69578.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R History status: New id, no parents	8	1
165	HL_79536.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
166	HL_11999.1 View exemplar Basepair signature: cWW-tHW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
167	HL_53446.1 View exemplar Basepair signature: cWW-cWW-tSH-R History status: New id, no parents	7	1
168	HL_36043.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
169	HL_82999.1 View exemplar Basepair signature: cWW-cWH-R History status: New id, no parents	5	1
170	HL_42288.1 View exemplar Basepair signature: cWW-R-R-cWS-cSH-R-R History status: New id, no parents	11	1

Coloring options:
Nucleotide numbers

New id, no parents 170;

Hairpin Loop Motif Atlas Release 4.24 Download Csv Json

Hairpin Loop Motif Atlas Release 4.24

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