Hairpin Loop Motif Atlas Release 4.20

#	Motif	Num Nts	Instances
1	HL_32352.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA (57) Other HL (8)	6	103
2	HL_85063.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 2 stacked bulged bases (35) T-loop with 2 bulged bases not stacked (4) Other HL (2)	7	49
3	HL_51315.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents UNCG (10) Other HL (4)	5	17
4	HL_05447.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	12
5	HL_14407.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents tRNA anticodon loop (7)	9	11
6	HL_01110.1 View exemplar Basepair signature: cWW-tSH-tSH-R-R History status: New id, no parents	8	10
7	HL_17328.1 View exemplar Basepair signature: cWW-R-R-tWH-R-R History status: New id, no parents	8	8
8	HL_84338.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R History status: New id, no parents	12	7
9	HL_77402.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	7
10	HL_10703.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	6
11	HL_05964.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 1 bulged base (2) Other HL (1)	7	6
12	HL_44200.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA with one bulged base (5)	6	6
13	HL_02575.1 View exemplar Basepair signature: cWW-R-cSW-R-cSH History status: New id, no parents	9	5
14	HL_84307.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
15	HL_75493.1 View exemplar Basepair signature: cWW-R-cSS-R-R History status: New id, no parents	8	5
16	HL_21094.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	5
17	HL_93238.1 View exemplar Basepair signature: cWW-cWW-R-cSS-cSS-R History status: New id, no parents	10	5
18	HL_91880.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
19	HL_22765.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents Other HL (1)	6	4
20	HL_08524.1 View exemplar Basepair signature: cWW-cWS-R-R History status: New id, no parents	6	4
21	HL_46850.1 View exemplar Basepair signature: cWW-R-R-R-tSH-R-R History status: New id, no parents	10	4
22	HL_69072.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	4
23	HL_35838.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	4
24	HL_20541.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	4
25	HL_15549.1 View exemplar Basepair signature: cWW-cSH History status: New id, no parents tRNA Sec D-loop (4)	5	4
26	HL_34999.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	4
27	HL_50499.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	4
28	HL_89470.1 View exemplar Basepair signature: cWW-R-R-tSH-R History status: New id, no parents	8	3
29	HL_90073.1 View exemplar Basepair signature: cWW-R-R-cSH-cSH-R-R History status: New id, no parents	10	3
30	HL_24817.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
31	HL_31559.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
32	HL_50965.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
33	HL_56853.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
34	HL_52240.1 View exemplar Basepair signature: cWW-tSH-tHW-R-R-R-R History status: New id, no parents	10	3
35	HL_45215.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	3
36	HL_40825.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
37	HL_20001.1 View exemplar Basepair signature: cWW-R-cSH History status: New id, no parents	6	3
38	HL_84561.1 View exemplar Basepair signature: cWW-tWW-R-R-R-R-R-R History status: New id, no parents	10	3
39	HL_34270.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
40	HL_71068.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
41	HL_75414.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	3
42	HL_70440.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
43	HL_74914.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
44	HL_06008.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
45	HL_98802.1 View exemplar Basepair signature: cWW-R-R-tWH-R History status: New id, no parents	7	2
46	HL_87761.1 View exemplar Basepair signature: cWW-tSH-cWS-cWS-R History status: New id, no parents tRNA Leu D-loop (2)	8	2
47	HL_15612.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
48	HL_72748.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	7	2
49	HL_54058.1 View exemplar Basepair signature: cWW-cWS-tSW History status: New id, no parents	6	2
50	HL_42232.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
51	HL_47294.1 View exemplar Basepair signature: cWW-tWH-R-R History status: New id, no parents	6	2
52	HL_72853.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	2
53	HL_35211.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	2
54	HL_34981.1 View exemplar Basepair signature: cWW-tSH-tHH-tWW-R-R-R History status: New id, no parents	11	2
55	HL_05480.1 View exemplar Basepair signature: cWW-tSH-cWS-tSW-R-R-R-R-R History status: New id, no parents tRNA Leu D-loop (2)	13	2
56	HL_14429.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
57	HL_88566.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
58	HL_41186.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
59	HL_31213.1 View exemplar Basepair signature: cWW-tSH-R History status: New id, no parents	5	2
60	HL_87030.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
61	HL_62584.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
62	HL_13392.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	2
63	HL_16259.1 View exemplar Basepair signature: cWW-tSH-cWS-cSH-R History status: New id, no parents	9	2
64	HL_30207.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
65	HL_80156.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	6	2
66	HL_75589.1 View exemplar Basepair signature: cWW-R-tSW-R-tWH-R-R-R History status: New id, no parents	11	2
67	HL_67430.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
68	HL_44358.1 View exemplar Basepair signature: cWW-tSH-cWH-tSH-tWH-R-tHW-tHW-R-R History status: New id, no parents	14	2
69	HL_99890.1 View exemplar Basepair signature: cWW-cWW-R-tSH-R History status: New id, no parents	8	2
70	HL_98494.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents	6	2
71	HL_37520.1 View exemplar Basepair signature: cWW-R-R-tHW-R-R-R-R-R-R-R History status: New id, no parents	13	2
72	HL_60897.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
73	HL_43729.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R History status: New id, no parents	8	2
74	HL_37218.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
75	HL_85265.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	2
76	HL_03697.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents	7	2
77	HL_14059.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	2
78	HL_97608.1 View exemplar Basepair signature: cWW-R-R-R-cSH History status: New id, no parents	8	2
79	HL_25997.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
80	HL_41529.1 View exemplar Basepair signature: cWW-tHW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
81	HL_05261.1 View exemplar Basepair signature: cWW-cWW-tSH-R History status: New id, no parents	7	1
82	HL_68429.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
83	HL_79640.1 View exemplar Basepair signature: cWW-cWH-R History status: New id, no parents	5	1
84	HL_80552.1 View exemplar Basepair signature: cWW-R-R-cWS-cSH-R-R History status: New id, no parents	11	1
85	HL_09342.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
86	HL_27023.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
87	HL_18384.1 View exemplar Basepair signature: cWW-R-R-R-R-tHW-R-R-R-R-R History status: New id, no parents	13	1
88	HL_19131.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
89	HL_77010.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
90	HL_72656.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
91	HL_54633.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
92	HL_62539.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
93	HL_18018.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
94	HL_15930.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
95	HL_44250.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	1
96	HL_23333.1 View exemplar Basepair signature: cWW-bif-R-R-R History status: New id, no parents	7	1
97	HL_06882.1 View exemplar Basepair signature: cWW-tSW History status: New id, no parents	4	1
98	HL_37238.1 View exemplar Basepair signature: cWW-cWS-R History status: New id, no parents tRNA Met D-loop (1)	5	1
99	HL_42153.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R History status: New id, no parents	11	1
100	HL_44365.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R-R-R-R History status: New id, no parents	11	1
101	HL_24011.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
102	HL_79652.1 View exemplar Basepair signature: cWW-R-R-R-cSS-R-cSW-R-R-R-R-R History status: New id, no parents	16	1
103	HL_07768.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
104	HL_73099.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
105	HL_19647.1 View exemplar Basepair signature: cWW-cWW-R-cSH-R History status: New id, no parents	8	1
106	HL_79057.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
107	HL_59270.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
108	HL_68371.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
109	HL_97877.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
110	HL_06424.1 View exemplar Basepair signature: cWW-tHH-cSH-R-R History status: New id, no parents	8	1
111	HL_33667.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
112	HL_69204.1 View exemplar Basepair signature: cWW-cWW-tWH-R-R-R History status: New id, no parents	9	1
113	HL_82127.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
114	HL_51639.1 View exemplar Basepair signature: cWW-tSH-tHH-R-R-R-R-R History status: New id, no parents	11	1
115	HL_38955.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
116	HL_55979.1 View exemplar Basepair signature: cWW-tSH-tHS-R-R History status: New id, no parents	8	1
117	HL_22974.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	1
118	HL_69711.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
119	HL_02332.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
120	HL_79039.1 View exemplar Basepair signature: cWW-tWW-R-R-R History status: New id, no parents	7	1
121	HL_19436.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
122	HL_95455.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
123	HL_32944.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	1
124	HL_85040.1 View exemplar Basepair signature: cWW-L-cWW-R-R-R-R-R History status: New id, no parents	11	1
125	HL_15975.1 View exemplar Basepair signature: cWW-tSW-R-R-R-R History status: New id, no parents	8	1
126	HL_85027.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-R-R-R-R-R-R-R History status: New id, no parents	14	1
127	HL_38291.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	1
128	HL_69797.1 View exemplar Basepair signature: cWW-R-R-R-tSW-R-R History status: New id, no parents	10	1
129	HL_57460.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, no parents	5	1
130	HL_83607.1 View exemplar Basepair signature: cWW-R-tSH-tHS-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	18	1
131	HL_41768.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
132	HL_21551.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
133	HL_50754.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	1
134	HL_99745.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
135	HL_98431.1 View exemplar Basepair signature: cWW-cWW-cWH-cWS-R History status: New id, no parents	9	1
136	HL_52023.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
137	HL_28730.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
138	HL_86856.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
139	HL_26119.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
140	HL_92832.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	1
141	HL_51330.1 View exemplar Basepair signature: cWW-cWS History status: New id, no parents	4	1
142	HL_62445.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
143	HL_03992.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	1
144	HL_56611.1 View exemplar Basepair signature: cWW-tSH-R-cWS-R-R-R History status: New id, no parents	10	1
145	HL_17273.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
146	HL_88924.1 View exemplar Basepair signature: cWW-cSS-cSH History status: New id, no parents	7	1
147	HL_28922.1 View exemplar Basepair signature: cWW History status: New id, no parents	2	1
148	HL_93638.1 View exemplar Basepair signature: cWW-cWW-cWW-R-R-R History status: New id, no parents	10	1
149	HL_66267.1 View exemplar Basepair signature: cWW-cWW-R-R-R History status: New id, no parents	8	1
150	HL_45565.1 View exemplar Basepair signature: cWW-tSH-tSH-bif-R-R-R-R-R-R-R History status: New id, no parents	15	1
151	HL_21317.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
152	HL_71470.1 View exemplar Basepair signature: cWW-bif-tSW History status: New id, no parents	6	1
153	HL_27742.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
154	HL_02892.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
155	HL_51016.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	1
156	HL_44553.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
157	HL_53541.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
158	HL_37141.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
159	HL_67267.1 View exemplar Basepair signature: cWW-cSH-R-R History status: New id, no parents	7	1
160	HL_00677.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
161	HL_27686.1 View exemplar Basepair signature: cWW-R-tSW-R-R History status: New id, no parents	8	1
162	HL_63106.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
163	HL_78394.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R History status: New id, no parents	8	1
164	HL_82780.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R-R-R-R History status: New id, no parents	12	1
165	HL_45412.1 View exemplar Basepair signature: cWW-tWH-tHH-R History status: New id, no parents	7	1
166	HL_07113.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
167	HL_90826.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
168	HL_46323.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
169	HL_51683.1 View exemplar Basepair signature: cWW-cWW-R-cSW-R-cSH History status: New id, no parents	11	1
170	HL_37355.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R History status: New id, no parents	8	1

Coloring options:
Nucleotide numbers

New id, no parents 170;

Hairpin Loop Motif Atlas Release 4.20 Download Csv Json

Hairpin Loop Motif Atlas Release 4.20

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