Hairpin Loop Motif Atlas Release 4.16

#	Motif	Num Nts	Instances
1	HL_87419.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA (57) Other HL (8)	6	103
2	HL_60244.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 2 stacked bulged bases (35) T-loop with 2 bulged bases not stacked (4) Other HL (2)	7	49
3	HL_42793.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents UNCG (10) Other HL (4)	5	17
4	HL_39521.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	12
5	HL_90868.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents tRNA anticodon loop (7)	9	11
6	HL_14391.1 View exemplar Basepair signature: cWW-tSH-tSH-R-R History status: New id, no parents	8	10
7	HL_89373.1 View exemplar Basepair signature: cWW-R-R-tWH-R-R History status: New id, no parents	8	8
8	HL_91287.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	7
9	HL_90323.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R History status: New id, no parents	12	7
10	HL_03514.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	6
11	HL_72251.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 1 bulged base (2) Other HL (1)	7	6
12	HL_12208.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents GNRA with one bulged base (5)	6	6
13	HL_66667.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	5
14	HL_18930.1 View exemplar Basepair signature: cWW-cWW-R-cSS-cSS-R History status: New id, no parents	10	5
15	HL_68084.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
16	HL_98972.1 View exemplar Basepair signature: cWW-R-cSW-R-cSH History status: New id, no parents	9	5
17	HL_30919.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
18	HL_30263.1 View exemplar Basepair signature: cWW-R-cSS-R-R History status: New id, no parents	8	5
19	HL_28434.1 View exemplar Basepair signature: cWW-cSH History status: New id, no parents tRNA Sec D-loop (4)	5	4
20	HL_80001.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	4
21	HL_18026.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	4
22	HL_86096.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents Other HL (1)	6	4
23	HL_62965.1 View exemplar Basepair signature: cWW-cWS-R-R History status: New id, no parents	6	4
24	HL_75602.1 View exemplar Basepair signature: cWW-R-R-R-tSH-R-R History status: New id, no parents	10	4
25	HL_77291.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	4
26	HL_45709.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	4
27	HL_84846.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	4
28	HL_16367.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
29	HL_36859.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
30	HL_66909.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	3
31	HL_97498.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
32	HL_11813.1 View exemplar Basepair signature: cWW-R-R-tSH-R History status: New id, no parents	8	3
33	HL_06813.1 View exemplar Basepair signature: cWW-R-R-cSH-cSH-R-R History status: New id, no parents	10	3
34	HL_91782.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
35	HL_84765.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
36	HL_62442.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
37	HL_07904.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
38	HL_31169.1 View exemplar Basepair signature: cWW-tSH-tHW-R-R-R-R History status: New id, no parents	10	3
39	HL_40777.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	3
40	HL_51903.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
41	HL_65440.1 View exemplar Basepair signature: cWW-R-cSH History status: New id, no parents	6	3
42	HL_99864.1 View exemplar Basepair signature: cWW-tWW-R-R-R-R-R-R History status: New id, no parents	10	3
43	HL_47892.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
44	HL_33682.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	6	2
45	HL_64923.1 View exemplar Basepair signature: cWW-R-tSW-R-tWH-R-R-R History status: New id, no parents	11	2
46	HL_36868.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
47	HL_19532.1 View exemplar Basepair signature: cWW-tSH-cWH-tSH-tWH-R-tHW-tHW-R-R History status: New id, no parents	14	2
48	HL_31379.1 View exemplar Basepair signature: cWW-cWW-R-tSH-R History status: New id, no parents	8	2
49	HL_07083.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents	6	2
50	HL_17051.1 View exemplar Basepair signature: cWW-R-R-tHW-R-R-R-R-R-R-R History status: New id, no parents	13	2
51	HL_86852.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
52	HL_58937.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R History status: New id, no parents	8	2
53	HL_41081.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
54	HL_67073.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	2
55	HL_63065.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents	7	2
56	HL_98054.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	2
57	HL_50715.1 View exemplar Basepair signature: cWW-R-R-R-cSH History status: New id, no parents	8	2
58	HL_10159.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
59	HL_04118.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
60	HL_16479.1 View exemplar Basepair signature: cWW-R-R-tWH-R History status: New id, no parents	7	2
61	HL_13585.1 View exemplar Basepair signature: cWW-tSH-cWS-cWS-R History status: New id, no parents tRNA Leu D-loop (2)	8	2
62	HL_16361.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
63	HL_97725.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	7	2
64	HL_25239.1 View exemplar Basepair signature: cWW-cWS-tSW History status: New id, no parents	6	2
65	HL_30291.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
66	HL_50284.1 View exemplar Basepair signature: cWW-tWH-R-R History status: New id, no parents	6	2
67	HL_26954.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	2
68	HL_38619.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	2
69	HL_29366.1 View exemplar Basepair signature: cWW-tSH-tHH-tWW-R-R-R History status: New id, no parents	11	2
70	HL_46583.1 View exemplar Basepair signature: cWW-tSH-cWS-tSW-R-R-R-R-R History status: New id, no parents tRNA Leu D-loop (2)	13	2
71	HL_43452.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
72	HL_37033.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
73	HL_02415.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
74	HL_65444.1 View exemplar Basepair signature: cWW-tSH-R History status: New id, no parents	5	2
75	HL_13305.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
76	HL_51735.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
77	HL_12599.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	2
78	HL_51108.1 View exemplar Basepair signature: cWW-tSH-cWS-cSH-R History status: New id, no parents	9	2
79	HL_97105.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
80	HL_11186.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
81	HL_12511.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
82	HL_16497.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	1
83	HL_11945.1 View exemplar Basepair signature: cWW-cWS History status: New id, no parents	4	1
84	HL_83238.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
85	HL_16906.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	1
86	HL_06678.1 View exemplar Basepair signature: cWW-tSH-R-cWS-R-R-R History status: New id, no parents	10	1
87	HL_36571.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
88	HL_52496.1 View exemplar Basepair signature: cWW-cSS-cSH History status: New id, no parents	7	1
89	HL_41661.1 View exemplar Basepair signature: cWW History status: New id, no parents	2	1
90	HL_38219.1 View exemplar Basepair signature: cWW-cWW-cWW-R-R-R History status: New id, no parents	10	1
91	HL_88758.1 View exemplar Basepair signature: cWW-cWW-R-R-R History status: New id, no parents	8	1
92	HL_78277.1 View exemplar Basepair signature: cWW-tSH-tSH-bif-R-R-R-R-R-R-R History status: New id, no parents	15	1
93	HL_64922.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
94	HL_17228.1 View exemplar Basepair signature: cWW-bif-tSW History status: New id, no parents	6	1
95	HL_39077.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
96	HL_44407.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
97	HL_32536.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	1
98	HL_49788.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
99	HL_54550.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
100	HL_42133.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
101	HL_11270.1 View exemplar Basepair signature: cWW-cSH-R-R History status: New id, no parents	7	1
102	HL_25924.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
103	HL_12472.1 View exemplar Basepair signature: cWW-R-tSW-R-R History status: New id, no parents	8	1
104	HL_56179.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
105	HL_24479.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R History status: New id, no parents	8	1
106	HL_96476.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R-R-R-R History status: New id, no parents	12	1
107	HL_25343.1 View exemplar Basepair signature: cWW-tWH-tHH-R History status: New id, no parents	7	1
108	HL_70903.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
109	HL_41859.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
110	HL_79285.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
111	HL_87309.1 View exemplar Basepair signature: cWW-cWW-R-cSW-R-cSH History status: New id, no parents	11	1
112	HL_73758.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R History status: New id, no parents	8	1
113	HL_99788.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
114	HL_34078.1 View exemplar Basepair signature: cWW-tHW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
115	HL_39869.1 View exemplar Basepair signature: cWW-cWW-tSH-R History status: New id, no parents	7	1
116	HL_68663.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
117	HL_33502.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	5	1
118	HL_13279.1 View exemplar Basepair signature: cWW-R-R-cWS-cSH-R-R History status: New id, no parents	11	1
119	HL_27908.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
120	HL_01671.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
121	HL_51074.1 View exemplar Basepair signature: cWW-R-R-R-R-tHW-R-R-R-R-R History status: New id, no parents	13	1
122	HL_82384.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
123	HL_44298.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
124	HL_85872.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
125	HL_39575.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
126	HL_57278.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
127	HL_23994.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
128	HL_14509.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
129	HL_38744.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	1
130	HL_20201.1 View exemplar Basepair signature: cWW-bif-R-R-R History status: New id, no parents	7	1
131	HL_25696.1 View exemplar Basepair signature: cWW-tSW History status: New id, no parents	4	1
132	HL_94903.1 View exemplar Basepair signature: cWW-cWS-R History status: New id, no parents tRNA Met D-loop (1)	5	1
133	HL_78169.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R History status: New id, no parents	11	1
134	HL_89105.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R-R-R-R History status: New id, no parents	11	1
135	HL_48804.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
136	HL_07273.1 View exemplar Basepair signature: cWW-R-R-R-cSS-R-cSW-R-R-R-R-R History status: New id, no parents	16	1
137	HL_49285.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
138	HL_95565.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
139	HL_42159.1 View exemplar Basepair signature: cWW-cWW-R-cSH-R History status: New id, no parents	8	1
140	HL_99494.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
141	HL_99826.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
142	HL_00532.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
143	HL_46163.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
144	HL_21922.1 View exemplar Basepair signature: cWW-tHH-cSH-R-R History status: New id, no parents	8	1
145	HL_77065.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
146	HL_13898.1 View exemplar Basepair signature: cWW-cWW-tWH-R-R-R History status: New id, no parents	9	1
147	HL_21817.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
148	HL_64645.1 View exemplar Basepair signature: cWW-tSH-tHH-R-R-R-R-R History status: New id, no parents	11	1
149	HL_30307.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
150	HL_54054.1 View exemplar Basepair signature: cWW-tSH-tHS-R-R History status: New id, no parents	8	1
151	HL_79820.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	1
152	HL_16499.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
153	HL_13113.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
154	HL_25330.1 View exemplar Basepair signature: cWW-tWW-R-R-R History status: New id, no parents	7	1
155	HL_82073.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
156	HL_01285.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
157	HL_97269.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	1
158	HL_70810.1 View exemplar Basepair signature: cWW-L-cWW-R-R-R-R-R History status: New id, no parents	11	1
159	HL_02389.1 View exemplar Basepair signature: cWW-tSW-R-R-R-R History status: New id, no parents	8	1
160	HL_31789.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-R-R-R-R-R-R-R History status: New id, no parents	14	1
161	HL_69352.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	1
162	HL_87687.1 View exemplar Basepair signature: cWW-R-R-R-tSW-R-R History status: New id, no parents	10	1
163	HL_02532.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, no parents	5	1
164	HL_51228.1 View exemplar Basepair signature: cWW-R-tSH-tHS-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	18	1
165	HL_65138.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
166	HL_96563.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
167	HL_06077.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	1
168	HL_07232.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
169	HL_71256.1 View exemplar Basepair signature: cWW-cWW-cWH-cWS-R History status: New id, no parents	9	1
170	HL_16356.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1

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Nucleotide numbers

New id, no parents 170;

Hairpin Loop Motif Atlas Release 4.16 Download Csv Json

Hairpin Loop Motif Atlas Release 4.16

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