Hairpin Loop Motif Atlas Release 4.12

#	Motif	Num Nts	Instances
1	HL_84512.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA (57) Other HL (8)	6	103
2	HL_66539.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 2 stacked bulged bases (35) T-loop with 2 bulged bases not stacked (4) Other HL (2)	7	49
3	HL_06146.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents UNCG (10) Other HL (4)	5	17
4	HL_77495.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	12
5	HL_89533.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents tRNA anticodon loop (7)	9	11
6	HL_29402.1 View exemplar Basepair signature: cWW-tSH-tSH-R-R History status: New id, no parents	8	10
7	HL_53996.1 View exemplar Basepair signature: cWW-R-R-tWH-R-R History status: New id, no parents	8	8
8	HL_51343.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	7
9	HL_85129.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R History status: New id, no parents	12	7
10	HL_52016.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	6
11	HL_17978.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 1 bulged base (2) Other HL (1)	7	6
12	HL_01199.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA with one bulged base (5)	6	6
13	HL_84841.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	5
14	HL_46042.1 View exemplar Basepair signature: cWW-cWW-R-cSS-cSS-R History status: New id, no parents	10	5
15	HL_91874.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
16	HL_55428.1 View exemplar Basepair signature: cWW-R-cSW-R-cSH History status: New id, no parents	9	5
17	HL_27607.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
18	HL_66410.1 View exemplar Basepair signature: cWW-R-cSS-R-R History status: New id, no parents	8	5
19	HL_12758.1 View exemplar Basepair signature: cWW-cSH History status: New id, no parents tRNA Sec D-loop (4)	5	4
20	HL_44911.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	4
21	HL_03272.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	4
22	HL_08183.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents Other HL (1)	6	4
23	HL_40331.1 View exemplar Basepair signature: cWW-cWS-R-R History status: New id, no parents	6	4
24	HL_32070.1 View exemplar Basepair signature: cWW-R-R-R-tSH-R-R History status: New id, no parents	10	4
25	HL_96529.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	4
26	HL_89201.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	4
27	HL_62808.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	4
28	HL_13968.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
29	HL_58793.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
30	HL_08607.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	3
31	HL_15381.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
32	HL_91037.1 View exemplar Basepair signature: cWW-R-R-tSH-R History status: New id, no parents	8	3
33	HL_74114.1 View exemplar Basepair signature: cWW-R-R-cSH-cSH-R-R History status: New id, no parents	10	3
34	HL_13806.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
35	HL_02805.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
36	HL_73306.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
37	HL_38309.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
38	HL_91017.1 View exemplar Basepair signature: cWW-tSH-tHW-R-R-R-R History status: New id, no parents	10	3
39	HL_71151.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	3
40	HL_93292.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
41	HL_10827.1 View exemplar Basepair signature: cWW-R-cSH History status: New id, no parents	6	3
42	HL_54157.1 View exemplar Basepair signature: cWW-tWW-R-R-R-R-R-R History status: New id, no parents	10	3
43	HL_82706.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
44	HL_27648.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	6	2
45	HL_19966.1 View exemplar Basepair signature: cWW-R-tSW-R-tWH-R-R-R History status: New id, no parents	11	2
46	HL_28000.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
47	HL_43262.1 View exemplar Basepair signature: cWW-tSH-cWH-tSH-tWH-R-tHW-tHW-R-R History status: New id, no parents	14	2
48	HL_45384.1 View exemplar Basepair signature: cWW-cWW-R-tSH-R History status: New id, no parents	8	2
49	HL_59307.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents	6	2
50	HL_39823.1 View exemplar Basepair signature: cWW-R-R-tHW-R-R-R-R-R-R-R History status: New id, no parents	13	2
51	HL_50778.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
52	HL_79137.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R History status: New id, no parents	8	2
53	HL_22945.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
54	HL_56026.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	2
55	HL_80458.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents	7	2
56	HL_18390.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	2
57	HL_65655.1 View exemplar Basepair signature: cWW-R-R-R-cSH History status: New id, no parents	8	2
58	HL_63919.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
59	HL_54599.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
60	HL_42540.1 View exemplar Basepair signature: cWW-R-R-tWH-R History status: New id, no parents	7	2
61	HL_87784.1 View exemplar Basepair signature: cWW-tSH-cWS-cWS-R History status: New id, no parents tRNA Leu D-loop (2)	8	2
62	HL_95502.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
63	HL_64180.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	7	2
64	HL_53845.1 View exemplar Basepair signature: cWW-cWS-tSW History status: New id, no parents	6	2
65	HL_65340.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
66	HL_04162.1 View exemplar Basepair signature: cWW-tWH-R-R History status: New id, no parents	6	2
67	HL_92113.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	2
68	HL_59515.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	2
69	HL_55122.1 View exemplar Basepair signature: cWW-tSH-tHH-tWW-R-R-R History status: New id, no parents	11	2
70	HL_90206.1 View exemplar Basepair signature: cWW-tSH-cWS-tSW-R-R-R-R-R History status: New id, no parents tRNA Leu D-loop (2)	13	2
71	HL_03487.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
72	HL_57171.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
73	HL_07890.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
74	HL_36319.1 View exemplar Basepair signature: cWW-tSH-R History status: New id, no parents	5	2
75	HL_60233.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
76	HL_24000.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
77	HL_38313.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	2
78	HL_01891.1 View exemplar Basepair signature: cWW-tSH-cWS-cSH-R History status: New id, no parents	9	2
79	HL_09293.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
80	HL_30744.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
81	HL_65420.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
82	HL_48125.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	1
83	HL_49551.1 View exemplar Basepair signature: cWW-cWS History status: New id, no parents	4	1
84	HL_40729.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
85	HL_19967.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	1
86	HL_43961.1 View exemplar Basepair signature: cWW-tSH-R-cWS-R-R-R History status: New id, no parents	10	1
87	HL_00921.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
88	HL_74675.1 View exemplar Basepair signature: cWW-cSS-cSH History status: New id, no parents	7	1
89	HL_04318.1 View exemplar Basepair signature: cWW History status: New id, no parents	2	1
90	HL_92239.1 View exemplar Basepair signature: cWW-cWW-cWW-R-R-R History status: New id, no parents	10	1
91	HL_33895.1 View exemplar Basepair signature: cWW-cWW-R-R-R History status: New id, no parents	8	1
92	HL_55636.1 View exemplar Basepair signature: cWW-tSH-tSH-bif-R-R-R-R-R-R-R History status: New id, no parents	15	1
93	HL_46700.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
94	HL_62919.1 View exemplar Basepair signature: cWW-bif-tSW History status: New id, no parents	6	1
95	HL_42238.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
96	HL_60001.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
97	HL_53606.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	1
98	HL_53687.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
99	HL_37680.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
100	HL_05088.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
101	HL_97118.1 View exemplar Basepair signature: cWW-cSH-R-R History status: New id, no parents	7	1
102	HL_81890.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
103	HL_23094.1 View exemplar Basepair signature: cWW-R-tSW-R-R History status: New id, no parents	8	1
104	HL_66319.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
105	HL_56727.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R History status: New id, no parents	8	1
106	HL_67164.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R-R-R-R History status: New id, no parents	12	1
107	HL_79671.1 View exemplar Basepair signature: cWW-tWH-tHH-R History status: New id, no parents	7	1
108	HL_77052.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
109	HL_65634.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
110	HL_07848.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
111	HL_78344.1 View exemplar Basepair signature: cWW-cWW-R-cSW-R-cSH History status: New id, no parents	11	1
112	HL_95132.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R History status: New id, no parents	8	1
113	HL_21875.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
114	HL_05744.1 View exemplar Basepair signature: cWW-tHW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
115	HL_91272.1 View exemplar Basepair signature: cWW-cWW-tSH-R History status: New id, no parents	7	1
116	HL_12614.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
117	HL_05387.1 View exemplar Basepair signature: cWW-cWH-R History status: New id, no parents	5	1
118	HL_64680.1 View exemplar Basepair signature: cWW-R-R-cWS-cSH-R-R History status: New id, no parents	11	1
119	HL_73012.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
120	HL_85070.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
121	HL_74457.1 View exemplar Basepair signature: cWW-R-R-R-R-tHW-R-R-R-R-R History status: New id, no parents	13	1
122	HL_39045.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
123	HL_65704.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
124	HL_27375.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
125	HL_56366.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
126	HL_90445.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
127	HL_63915.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
128	HL_18562.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
129	HL_73775.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	1
130	HL_11070.1 View exemplar Basepair signature: cWW-bif-R-R-R History status: New id, no parents	7	1
131	HL_84186.1 View exemplar Basepair signature: cWW-tSW History status: New id, no parents	4	1
132	HL_96547.1 View exemplar Basepair signature: cWW-cWS-R History status: New id, no parents tRNA Met D-loop (1)	5	1
133	HL_10989.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R History status: New id, no parents	11	1
134	HL_89993.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R-R-R-R History status: New id, no parents	11	1
135	HL_20870.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
136	HL_85932.1 View exemplar Basepair signature: cWW-R-R-R-cSS-R-cSW-R-R-R-R-R History status: New id, no parents	16	1
137	HL_49685.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
138	HL_99803.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
139	HL_56068.1 View exemplar Basepair signature: cWW-cWW-R-cSH-R History status: New id, no parents	8	1
140	HL_33610.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
141	HL_82506.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
142	HL_35373.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
143	HL_04639.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
144	HL_14819.1 View exemplar Basepair signature: cWW-tHH-cSH-R-R History status: New id, no parents	8	1
145	HL_96014.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
146	HL_44073.1 View exemplar Basepair signature: cWW-cWW-tWH-R-R-R History status: New id, no parents	9	1
147	HL_62928.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
148	HL_06333.1 View exemplar Basepair signature: cWW-tSH-tHH-R-R-R-R-R History status: New id, no parents	11	1
149	HL_57720.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
150	HL_02272.1 View exemplar Basepair signature: cWW-tSH-tHS-R-R History status: New id, no parents	8	1
151	HL_54262.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	1
152	HL_43236.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
153	HL_94248.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
154	HL_34115.1 View exemplar Basepair signature: cWW-tWW-R-R-R History status: New id, no parents	7	1
155	HL_27793.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
156	HL_50254.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
157	HL_79024.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	1
158	HL_73619.1 View exemplar Basepair signature: cWW-L-cWW-R-R-R-R-R History status: New id, no parents	11	1
159	HL_11962.1 View exemplar Basepair signature: cWW-tSW-R-R-R-R History status: New id, no parents	8	1
160	HL_08251.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-R-R-R-R-R-R-R History status: New id, no parents	14	1
161	HL_17919.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	1
162	HL_25736.1 View exemplar Basepair signature: cWW-R-R-R-tSW-R-R History status: New id, no parents	10	1
163	HL_05599.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, no parents	5	1
164	HL_01575.1 View exemplar Basepair signature: cWW-R-tSH-tHS-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	18	1
165	HL_41199.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
166	HL_89129.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
167	HL_54984.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	1
168	HL_35242.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
169	HL_68883.1 View exemplar Basepair signature: cWW-cWW-cWH-cWS-R History status: New id, no parents	9	1
170	HL_15945.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1

Coloring options:
Nucleotide numbers

New id, no parents 170;

Hairpin Loop Motif Atlas Release 4.12 Download Csv Json

Hairpin Loop Motif Atlas Release 4.12

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