Hairpin Loop Motif Atlas Release 4.1

#	Motif	Num Nts	Instances
1	HL_52223.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA (57) Other HL (8)	6	103
2	HL_51510.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 2 stacked bulged bases (35) T-loop with 2 bulged bases not stacked (4) Other HL (2)	7	49
3	HL_95431.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents UNCG (10) Other HL (4)	5	17
4	HL_89020.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	12
5	HL_33374.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents tRNA anticodon loop (7)	9	11
6	HL_03902.1 View exemplar Basepair signature: cWW-tSH-tSH-R-R History status: New id, no parents	8	10
7	HL_74314.1 View exemplar Basepair signature: cWW-R-R-tWH-R-R History status: New id, no parents	8	8
8	HL_32675.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R History status: New id, no parents	12	7
9	HL_12513.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	7
10	HL_64187.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	6
11	HL_14315.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents T-loop with 1 bulged base (2) Other HL (1)	7	6
12	HL_00093.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents GNRA with one bulged base (5)	6	6
13	HL_93768.1 View exemplar Basepair signature: cWW-R-cSW-R-cSH History status: New id, no parents	9	5
14	HL_06741.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
15	HL_29599.1 View exemplar Basepair signature: cWW-R-cSS-R-R History status: New id, no parents	8	5
16	HL_75470.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	5
17	HL_39775.1 View exemplar Basepair signature: cWW-cWW-R-cSS-cSS-R History status: New id, no parents	10	5
18	HL_57057.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	5
19	HL_79523.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents Other HL (1)	6	4
20	HL_31074.1 View exemplar Basepair signature: cWW-cWS-R-R History status: New id, no parents	6	4
21	HL_28949.1 View exemplar Basepair signature: cWW-R-R-R-tSH-R-R History status: New id, no parents	10	4
22	HL_51519.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	4
23	HL_43847.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	4
24	HL_55253.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	4
25	HL_70191.1 View exemplar Basepair signature: cWW-cSH History status: New id, no parents tRNA Sec D-loop (4)	5	4
26	HL_94297.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	4
27	HL_78881.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	4
28	HL_99988.1 View exemplar Basepair signature: cWW-R-R-tSH-R History status: New id, no parents	8	3
29	HL_83623.1 View exemplar Basepair signature: cWW-R-R-cSH-cSH-R-R History status: New id, no parents	10	3
30	HL_04898.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
31	HL_60935.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
32	HL_73597.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
33	HL_28280.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
34	HL_24875.1 View exemplar Basepair signature: cWW-tSH-tHW-R-R-R-R History status: New id, no parents	10	3
35	HL_36630.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	3
36	HL_56778.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
37	HL_36290.1 View exemplar Basepair signature: cWW-R-cSH History status: New id, no parents	6	3
38	HL_65169.1 View exemplar Basepair signature: cWW-tWW-R-R-R-R-R-R History status: New id, no parents	10	3
39	HL_02470.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	3
40	HL_29965.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	3
41	HL_68593.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	3
42	HL_53526.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	3
43	HL_85635.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
44	HL_44732.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
45	HL_52197.1 View exemplar Basepair signature: cWW-R-R-tWH-R History status: New id, no parents	7	2
46	HL_16115.1 View exemplar Basepair signature: cWW-tSH-cWS-cWS-R History status: New id, no parents tRNA Leu D-loop (2)	8	2
47	HL_16659.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
48	HL_57872.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	7	2
49	HL_91279.1 View exemplar Basepair signature: cWW-cWS-tSW History status: New id, no parents	6	2
50	HL_86069.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
51	HL_75671.1 View exemplar Basepair signature: cWW-tWH-R-R History status: New id, no parents	6	2
52	HL_47037.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	2
53	HL_98091.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	2
54	HL_54223.1 View exemplar Basepair signature: cWW-tSH-tHH-tWW-R-R-R History status: New id, no parents	11	2
55	HL_69867.1 View exemplar Basepair signature: cWW-tSH-cWS-tSW-R-R-R-R-R History status: New id, no parents tRNA Leu D-loop (2)	13	2
56	HL_43296.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
57	HL_83786.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
58	HL_21375.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
59	HL_84327.1 View exemplar Basepair signature: cWW-tSH-R History status: New id, no parents	5	2
60	HL_31864.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
61	HL_97056.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
62	HL_93025.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	2
63	HL_86686.1 View exemplar Basepair signature: cWW-tSH-cWS-cSH-R History status: New id, no parents	9	2
64	HL_15226.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	2
65	HL_95420.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	6	2
66	HL_57035.1 View exemplar Basepair signature: cWW-R-tSW-R-tWH-R-R-R History status: New id, no parents	11	2
67	HL_94733.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	2
68	HL_38776.1 View exemplar Basepair signature: cWW-tSH-cWH-tSH-tWH-R-tHW-tHW-R-R History status: New id, no parents	14	2
69	HL_31277.1 View exemplar Basepair signature: cWW-cWW-R-tSH-R History status: New id, no parents	8	2
70	HL_78322.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, no parents	6	2
71	HL_30254.1 View exemplar Basepair signature: cWW-R-R-tHW-R-R-R-R-R-R-R History status: New id, no parents	13	2
72	HL_16968.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	2
73	HL_17081.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R History status: New id, no parents	8	2
74	HL_69529.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	2
75	HL_39699.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	2
76	HL_47312.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: New id, no parents	7	2
77	HL_18475.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	2
78	HL_84228.1 View exemplar Basepair signature: cWW-R-R-R-cSH History status: New id, no parents	8	2
79	HL_97548.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
80	HL_60281.1 View exemplar Basepair signature: cWW-tHW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
81	HL_88040.1 View exemplar Basepair signature: cWW-cWW-tSH-R History status: New id, no parents	7	1
82	HL_33139.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
83	HL_23139.1 View exemplar Basepair signature: cWW-cWH-R History status: New id, no parents	5	1
84	HL_48270.1 View exemplar Basepair signature: cWW-R-R-cWS-cSH-R-R History status: New id, no parents	11	1
85	HL_23196.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
86	HL_54971.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
87	HL_70095.1 View exemplar Basepair signature: cWW-R-R-R-R-tHW-R-R-R-R-R History status: New id, no parents	13	1
88	HL_87291.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
89	HL_73263.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
90	HL_61311.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
91	HL_24279.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
92	HL_48165.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
93	HL_69120.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
94	HL_90711.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
95	HL_26087.1 View exemplar Basepair signature: cWW History status: New id, no parents	3	1
96	HL_23106.1 View exemplar Basepair signature: cWW-bif-R-R-R History status: New id, no parents	7	1
97	HL_30622.1 View exemplar Basepair signature: cWW-tSW History status: New id, no parents	4	1
98	HL_04220.1 View exemplar Basepair signature: cWW-cWS-R History status: New id, no parents tRNA Met D-loop (1)	5	1
99	HL_41749.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R History status: New id, no parents	11	1
100	HL_03688.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R-R-R-R History status: New id, no parents	11	1
101	HL_14590.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
102	HL_36415.1 View exemplar Basepair signature: cWW-R-R-R-cSS-R-cSW-R-R-R-R-R History status: New id, no parents	16	1
103	HL_04545.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
104	HL_33763.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
105	HL_19657.1 View exemplar Basepair signature: cWW-cWW-R-cSH-R History status: New id, no parents	8	1
106	HL_81563.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
107	HL_02005.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
108	HL_16464.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
109	HL_39646.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
110	HL_87464.1 View exemplar Basepair signature: cWW-tHH-cSH-R-R History status: New id, no parents	8	1
111	HL_05809.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
112	HL_79329.1 View exemplar Basepair signature: cWW-cWW-tWH-R-R-R History status: New id, no parents	9	1
113	HL_11066.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
114	HL_79447.1 View exemplar Basepair signature: cWW-tSH-tHH-R-R-R-R-R History status: New id, no parents	11	1
115	HL_13984.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
116	HL_33497.1 View exemplar Basepair signature: cWW-R-R-R-tSH-R-R History status: New id, no parents	8	1
117	HL_37864.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: New id, no parents	7	1
118	HL_87740.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: New id, no parents	8	1
119	HL_11068.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
120	HL_95616.1 View exemplar Basepair signature: cWW-tWW-R-R-R History status: New id, no parents	7	1
121	HL_63527.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
122	HL_24454.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
123	HL_49345.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: New id, no parents	11	1
124	HL_63786.1 View exemplar Basepair signature: cWW-L-cWW-R-R-R-R-R History status: New id, no parents	11	1
125	HL_70324.1 View exemplar Basepair signature: cWW-tSW-R-R-R-R History status: New id, no parents	8	1
126	HL_76983.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-R-R-R-R-R-R-R History status: New id, no parents	14	1
127	HL_37068.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, no parents	9	1
128	HL_07435.1 View exemplar Basepair signature: cWW-R-R-R-tSW-R-R History status: New id, no parents	10	1
129	HL_54159.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, no parents	5	1
130	HL_72362.1 View exemplar Basepair signature: cWW-R-tSH-tHS-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	18	1
131	HL_97366.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: New id, no parents	11	1
132	HL_29885.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
133	HL_32034.1 View exemplar Basepair signature: cWW-tSW-R History status: New id, no parents	5	1
134	HL_33350.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
135	HL_90331.1 View exemplar Basepair signature: cWW-cWW-cWH-cWS-R History status: New id, no parents	9	1
136	HL_22721.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
137	HL_68428.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	13	1
138	HL_66889.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
139	HL_69936.1 View exemplar Basepair signature: cWW-cWW-R History status: New id, no parents	6	1
140	HL_17331.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: New id, no parents	9	1
141	HL_76043.1 View exemplar Basepair signature: cWW-cWS History status: New id, no parents	4	1
142	HL_46215.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
143	HL_86078.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, no parents	7	1
144	HL_52228.1 View exemplar Basepair signature: cWW-tSH-R-cWS-R-R-R History status: New id, no parents	10	1
145	HL_92596.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, no parents	7	1
146	HL_66373.1 View exemplar Basepair signature: cWW-cSS-cSH History status: New id, no parents	7	1
147	HL_81219.1 View exemplar Basepair signature: cWW History status: New id, no parents	2	1
148	HL_07634.1 View exemplar Basepair signature: cWW-cWW-cWW-R-R-R History status: New id, no parents	10	1
149	HL_25925.1 View exemplar Basepair signature: cWW-cWW-R-R-R History status: New id, no parents	8	1
150	HL_78835.1 View exemplar Basepair signature: cWW-tSH-tSH-bif-R-R-R-R-R-R-R History status: New id, no parents	15	1
151	HL_94372.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
152	HL_62841.1 View exemplar Basepair signature: cWW-bif-tSW History status: New id, no parents	6	1
153	HL_85323.1 View exemplar Basepair signature: cWW-R-R History status: New id, no parents	5	1
154	HL_44576.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
155	HL_60339.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, no parents	10	1
156	HL_61715.1 View exemplar Basepair signature: cWW-R History status: New id, no parents	4	1
157	HL_31881.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
158	HL_58763.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R-R-R History status: New id, no parents	15	1
159	HL_49457.1 View exemplar Basepair signature: cWW-cSH-R-R History status: New id, no parents	7	1
160	HL_82508.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
161	HL_74905.1 View exemplar Basepair signature: cWW-R-tSW-R-R History status: New id, no parents	8	1
162	HL_19475.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, no parents	9	1
163	HL_91451.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R History status: New id, no parents	8	1
164	HL_17488.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R-R-R-R History status: New id, no parents	12	1
165	HL_31157.1 View exemplar Basepair signature: cWW-tWH-tHH-R History status: New id, no parents	7	1
166	HL_87425.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, no parents	6	1
167	HL_72483.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: New id, no parents	10	1
168	HL_40657.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, no parents	7	1
169	HL_12469.1 View exemplar Basepair signature: cWW-cWW-R-cSW-R-cSH History status: New id, no parents	11	1
170	HL_53413.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R History status: New id, no parents	8	1

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Nucleotide numbers

New id, no parents 170;

Hairpin Loop Motif Atlas Release 4.1 Download Csv Json

Hairpin Loop Motif Atlas Release 4.1

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