1.13 | 1.14

Changes in PDB files used for clustering

Release 1.13 has 220 PDB files, release 1.14 has 223 PDB files, 219 of them are identical.

1 equivalence classes changed representatives: 3V2F → 4NVV.

3 new structures in release 1.14: 1VW3, 4KR6, 4KR7.

Obsolete: 3V2F → 4V8I.

Help Every Motif Atlas release is based on a representative set of PDB files. When comparing two releases, it's important to know how the input data changed.

Representative sets are quite stable in time, but PDB files from the older releases can be replaced by newer PDB files or removed from the set altogether if the structure is obsoleted by PDB without replacement.

PDB files from the newer release either replace representatives in the existing equivalence classes or come from new equivalence classes.

Redistribution of motif instances

Loading the Sankey diagram...

Changes in motif groups

Release 1.13 has 278 motif groups, release 1.14 has 282 motif groups, 172 of them are identical.

53 motif groups were updated, 53 groups are present only in release 1.13, 57 groups are only in release 1.14.

Help The Sankey diagram shows redistribution of motif instances (loops) between two releases. The rectangles represent the motif groups and are colored as follows:

Added motif groups: green
Removed motif groups: grey
Updated motif groups: orange
Added motif instances: green
Removed motif instances: grey

Hover over the links connecting the motif groups to see which motif instances were exchanged.

Identical motif groups

#	Motif id	Instances	Description
1	IL_47444.3	9	SRP Loop E-like motif
2	IL_92114.3	9	GAAA loop receptor "platform" motif
3	IL_02809.3	9	REV element IL with syn G \| Tandem cWW pairs (Not AU or GC)
4	IL_92321.4	7	Triple sheared (tSH-tHS-tHS) with cWW Wobble base flanking motif
5	IL_73000.2	7	cHS-cWS
6	IL_77263.2	6	Kink-turn from U4
7	IL_31663.1	4	23S H73 ILa : Part of larger Motif
8	IL_48918.3	4	Kink-turn variant
9	IL_34363.2	4	Kink-turn from 23S H42
10	IL_28572.2	4	16S h18 kink-turn like motif
11	IL_42251.1	4
12	IL_31066.3	4	SSU Helix 44 (h44) extension
13	IL_39980.1	4
14	IL_01080.1	4
15	IL_39526.4	4
16	IL_95652.3	4	SSU Helix 27 (h27) IL Sarcin-Ricin motif
17	IL_22732.1	4	tSH-inserted-tHS
18	IL_82188.2	4	LSU H68 IL from H.m.
19	IL_47758.2	4	REV element IL with syn G \| Tandem cWW pairs (Not AU or GC)
20	IL_34628.2	3	Kink-turn
21	IL_06180.1	3	tHS tHH bulge with S-turn
22	IL_52173.1	3
23	IL_74876.2	3	Double-sheared with two unpaired, stacked As. LSU Helix 68 IL4.
24	IL_30840.2	3
25	IL_25271.2	3	SSU Helix 8 (h8) IL E.c. and Yeast
26	IL_07300.2	3
27	IL_06211.3	3
28	IL_79955.2	3	SSU Helix (23) h23 IL1
29	IL_82563.1	3	Thi-box riboswitch T-loop
30	IL_37053.1	3	Kink-turn from 23S H58
31	IL_43946.1	3
32	IL_80348.3	3	23S H91 IL
33	IL_50521.1	2
34	IL_90057.1	2
35	IL_30381.1	2	tHS tHH bulge with S-turn
36	IL_37197.1	2
37	IL_78744.1	2	Quadruple Sheared (tSH-tSH-tHS-tHS)
38	IL_87548.1	2
39	IL_09587.1	2
40	IL_21639.1	2
41	IL_45794.1	2
42	IL_52940.1	2
43	IL_09882.1	2
44	IL_98566.1	2
45	IL_46435.1	2
46	IL_31707.1	2	Vitamin B12 aptamer
47	IL_12147.1	2	Single sheared with bulged bases \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
48	IL_16330.1	2
49	IL_40892.1	2
50	IL_97833.1	2
51	IL_80093.1	2
52	IL_12211.1	2
53	IL_23414.1	2
54	IL_11751.1	2
55	IL_76095.3	2	Motif from Hairpin Ribozyme
56	IL_94744.1	2	Sarcin-ricin motif with extra cWW GA pair
57	IL_90735.1	2
58	IL_21495.1	2
59	IL_96446.1	2
60	IL_70401.1	2
61	IL_65137.1	2	Kink-turn like motif in Group I Intron
62	IL_77076.1	2
63	IL_33842.1	2
64	IL_85805.1	1
65	IL_41791.1	1
66	IL_68827.1	1	Reverse Kink-Turn
67	IL_59934.1	1	SSU Helix 23 (h23) Kink-turn E. coli
68	IL_89794.1	1
69	IL_52509.1	1
70	IL_88119.1	1
71	IL_98924.1	1
72	IL_41139.1	1
73	IL_06847.1	1	Group II Intron IL
74	IL_30067.1	1
75	IL_05513.1	1
76	IL_83250.1	1	16S h40 3WJ T.th.
77	IL_88865.1	1
78	IL_86059.1	1
79	IL_97191.1	1	Sarcin-ricin motif with cWW UU instead of tSH basepair.
80	IL_83920.1	1
81	IL_53988.1	1
82	IL_11778.1	1
83	IL_71685.1	1	Sarcin-like with an intercalated basepair
84	IL_64589.1	1
85	IL_54470.1	1	tHS tHH bulge with S-turn
86	IL_60649.1	1	Kink-turn
87	IL_52610.1	1
88	IL_78513.1	1
89	IL_63952.1	1
90	IL_57977.1	1
91	IL_63253.1	1	LSU H77 \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW
92	IL_06468.1	1	16S h40 3WJ E.c.
93	IL_52958.1	1
94	IL_20775.1	1	tSH-inserted
95	IL_77014.1	1
96	IL_54954.1	1	Sarcin-Ricin with extra tSH UA basepair. Yeast LSU H11.
97	IL_23639.1	1	tWH-tHS-L-cWW
98	IL_98655.1	1	Part of H71 Junction in 26S rRNA from Yeast
99	IL_82601.1	1	Tandem cWW water-inserted CU pairs
100	IL_91089.1	1
101	IL_77296.1	1
102	IL_87394.1	1
103	IL_02835.1	1
104	IL_43316.1	1
105	IL_12507.1	1
106	IL_47687.1	1
107	IL_55649.1	1
108	IL_06808.1	1	Double sheared (tSH-tSH) one bulged base.
109	IL_75328.1	1
110	IL_06306.1	1
111	IL_76486.1	1	Sarcin-ricin motif with syn G
112	IL_17682.1	1	Sarcin-ricin motif from Eukaryal LSU Helix 11
113	IL_87523.1	1
114	IL_03282.1	1
115	IL_42891.1	1
116	IL_80505.1	1
117	IL_22909.1	1
118	IL_28644.1	1
119	IL_54450.1	1
120	IL_81398.1	1
121	IL_97842.1	1
122	IL_46306.1	1
123	IL_68767.1	1
124	IL_15205.1	1
125	IL_21077.1	1
126	IL_94973.1	1	Sarcin-Ricin from Group II Intron with inserted base and poor modeling:
127	IL_63133.1	1	Single sheared with bulged bases \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
128	IL_09333.1	1	SSU Helix 8 (h8) IL T. thermophilus
129	IL_03110.1	1
130	IL_06177.1	1	cWW AG or UU
131	IL_82650.1	1
132	IL_26868.1	1
133	IL_06421.1	1	Single sheared with bulged bases
134	IL_75415.1	1	Pseudo-knot forming internal loop
135	IL_37347.1	1
136	IL_06471.1	1
137	IL_91904.1	1
138	IL_85510.1	1
139	IL_49527.1	1
140	IL_57285.1	1
141	IL_27640.1	1
142	IL_21254.1	1	SSU Helix 11 (h11) IL Kink-turn T. thermophilus
143	IL_80714.1	1
144	IL_86981.1	1	Sarcin-ricin motif with CC BIfurcated pair. H.m. LSU H18.
145	IL_25307.1	1
146	IL_11302.1	1
147	IL_80652.1	1
148	IL_27243.1	1
149	IL_91078.1	1
150	IL_31224.1	1	23S H91 IL
151	IL_05221.1	1
152	IL_26971.1	1
153	IL_09491.1	1
154	IL_88367.1	1
155	IL_23448.1	1
156	IL_40845.1	1
157	IL_39324.1	1
158	IL_02897.1	1	Part of Helix 71 (H71) junction in 23S rRNA E.c. H.m. and Tetrahymena \| Part of H71 junction in 23S rRNA from T.th.
159	IL_76263.1	1
160	IL_91379.1	1
161	IL_66744.1	1	SSU Helix 21 (h21) IL2 E.coli
162	IL_31006.1	1	tSH-tHW-L-bif-cWW
163	IL_31754.1	1	Sarcin-ricin H95 23S rRNA E.c.
164	IL_61730.1	1
165	IL_86336.1	1
166	IL_25082.1	1
167	IL_53323.1	1
168	IL_59529.1	1
169	IL_02957.1	1
170	IL_40527.1	1	Kink-turn
171	IL_91044.1	1
172	IL_27668.1	1

Updated motif groups

#	Motif id	Instances	Description
1	IL_97217.12	262	1-3 bulged nucleotides, same chain \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW
2	IL_41766.7	57	Tandem cWW pairs (Not AU or GC)
3	IL_39199.5	56	Hoogsteen-edge Platform, Single bulged base
4	IL_56465.5	51	Single, unpaired intercalated base, consensus A
5	IL_44540.5	45	Sugar-edge, 1-base platform, consensus tHS
6	IL_87904.6	32	Triple sheared (tSH-tHS-tHS) no inserted bases
7	IL_82444.2	28	cWW AG or UU \| cWH basepair with syn base \| cWH basepair with syn base \| cWH basepair with syn base \| cWW AG or water inserted cWW Y-Y. \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif
8	IL_13959.5	27	Double Sheared (tSH-tHS)
9	IL_73276.6	24	C-loop
10	IL_28947.3	24	23S H91 IL \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW \| LSU H77 \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW
11	IL_65553.9	23	Kink-turn
12	IL_93424.5	22	tSH-inserted-tHW
13	IL_92027.4	19	16S h21 S8 binding site
14	IL_85647.4	18	Sarcin-ricin parent motif with 15 Nts
15	IL_55938.5	17	LSU Helix 89 (H89) IL2. cSH Platform.
16	IL_24982.6	16	SSU helix 20 (h20) IL. Prokaryal 5S Loop E Sub-motif
17	IL_49493.5	15	Sarcin-ricin Parent Motif - bacterial LSU H95 IL
18	IL_94430.6	14	16S h32-h33-h34 3WJ
19	IL_46648.7	14	23S H91 IL \| Single-Base Intercalation Site
20	IL_37104.4	13	Single sheared with bulged bases \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 23S H73 ILa : Part of larger Motif \| Single sheared with bulged bases \| Single sheared with bulged bases \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
21	IL_43124.3	13	23S H73 ILa : Part of larger Motif \| Single sheared with bulged bases
22	IL_31555.6	13	Tandem sheared with inserted, unpaired purine. \| Leadzyme Motif. SSU Decoding site motif, extended. \| cWW-L-cWW-cWW \| Leadzyme Motif. LSU H101 IL2. SSU Decoding site. \| Tandem sheared with inserted, unpaired purine. \| cHS-cWS triple and Wobble. SSU Helix 44 (h44) IL1.
23	IL_24546.5	10	23S H41 IL and 16S h18 IL : Has large bulge on one side
24	IL_58291.5	10	Recurrent Sub-motif found in junctions
25	IL_53635.4	7	LSU Helix 32 (H32) IL
26	IL_97057.4	7
27	IL_08926.4	7	23S H91 IL
28	IL_86357.4	6	LSU Helix 61 IL2
29	IL_70237.4	6
30	IL_72158.4	6	LSU Helix 62 (H62) IL
31	IL_25230.4	6	Bacterial 5S rRNA Loop E
32	IL_13069.4	6	LSU 3WJ H32-H33-H35A
33	IL_93568.3	6	Triple Sheared (tSH-tHS-tHS) with wobble cWW.
34	IL_02359.4	5
35	IL_44067.5	5	Quadruple sheared (tSH-tHS-tHS-tHS). LSU Helix 2 (H2).
36	IL_90133.4	5
37	IL_09530.2	5	Double S-turn motif
38	IL_79083.4	5
39	IL_16166.5	4	23S H91 IL
40	IL_87065.2	4	23S H91 IL \| Single-Base Intercalation Site
41	IL_69106.2	3	Leadzyme Motif. SSU Decoding site motif, extended. \| cWW-L-cWW-cWW \| Leadzyme Motif. SSU Decoding site motif, extended. \| cWW-L-cWW-cWW \| Leadzyme Motif. LSU H101 IL2. SSU Decoding site.
42	IL_94403.6	3	LSU H77
43	IL_69536.2	3	LSU Helix 96 (H96) IL2
44	IL_05723.2	3
45	IL_58586.3	3
46	IL_62499.8	3
47	IL_97509.2	3	Double sheared with wobble cWW.
48	IL_98421.5	3	SSU Helix 12 (h12) IL \| SSU Helix 12 (h12) IL \| LSU Eukaryal Helix 96 (H96) IL1
49	IL_67887.2	3
50	IL_16415.3	2	SSU Helix 23 (h23) Kink-turn T. thermophilus
51	IL_95150.7	2
52	IL_28003.2	2
53	IL_80494.3	2	LSU H58 IL2 H.m.

Removed motif groups

#	Motif id	Instances	Description
1	IL_47174.11	219	cWW AG or water inserted cWW Y-Y.
2	IL_92109.3	15	cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW
3	IL_17212.2	11	cWW AG or UU \| cWH basepair with syn base \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif
4	IL_90459.3	9	cWW AG or UU
5	IL_46301.1	7	Leadzyme Motif. SSU Decoding site motif, extended. \| cWW-L-cWW-cWW \| Leadzyme Motif. LSU H101 IL2. SSU Decoding site. \| Tandem sheared with inserted, unpaired purine. \| cHS-cWS triple and Wobble. SSU Helix 44 (h44) IL1.
6	IL_25300.3	7	16S h19 IL and 23S H41 IL
7	IL_25380.1	6	LSU Helix 89 (H89) IL2
8	IL_39585.1	6	Double-sheared with two unpaired, stacked As. LSU Helix 68 IL4.
9	IL_70173.1	6	Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif \| cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
10	IL_05684.1	5	tHS tHH bulge with S-turn \| Double S-turn motif
11	IL_21333.2	4	tSH-tHW-bulge
12	IL_45262.4	4
13	IL_97296.1	4	Leadzyme Motif. SSU Decoding site motif, extended. \| cWW-L-cWW-cWW \| Leadzyme Motif. LSU H101 IL2. SSU Decoding site.
14	IL_54966.1	4	cHS-cWS triple and Wobble. SSU Helix 44 (h44) IL1.
15	IL_98591.3	4
16	IL_38807.3	4
17	IL_89028.6	3	Part of Helix 71 (H71) junction in 23S rRNA E.c. H.m. and Tetrahymena \| Part of H71 junction in 23S rRNA from T.th.
18	IL_47875.1	3	LSU H77 \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW
19	IL_35043.1	3	cWW AG or UU \| cWH basepair with syn base \| cWH basepair with syn base
20	IL_57785.5	2	SSU Decoding Site -- Human. Bulge-cSW-tHS
21	IL_31039.1	2
22	IL_00998.1	2
23	IL_33964.1	2
24	IL_43877.1	2	Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif \| cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
25	IL_96206.3	2
26	IL_23262.4	2
27	IL_46034.3	2
28	IL_15840.2	2	Triple Sheared with unpaired, inserted A
29	IL_24293.1	2	23S H73 ILa : Part of larger Motif \| Single sheared with bulged bases \| 23S H73 ILa : Part of larger Motif \| Single sheared with bulged bases \| Single sheared with bulged bases \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
30	IL_37406.1	2
31	IL_39355.1	2	SSU Helix 12 (h12) IL \| LSU Eukaryal Helix 96 (H96) IL1
32	IL_46990.1	2
33	IL_87507.1	2	tHS tHH bulge with S-turn
34	IL_17603.1	1
35	IL_18675.1	1	cWW-bulge-cWW
36	IL_41153.1	1
37	IL_47732.1	1
38	IL_58454.1	1
39	IL_69799.1	1
40	IL_21421.1	1
41	IL_49976.1	1
42	IL_13777.1	1	cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW
43	IL_37325.1	1
44	IL_50911.1	1	16S h34 ILa : Part of larger motif
45	IL_70299.1	1
46	IL_71942.1	1
47	IL_17066.1	1
48	IL_25181.1	1
49	IL_46721.1	1
50	IL_56513.1	1
51	IL_83856.1	1
52	IL_99397.1	1	cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
53	IL_57364.1	1	LSU Helix 89 (H89) IL2

Added motif groups

#	Motif id	Instances	Description
1	IL_78141.1	228	cWW AG or UU \| cWW AG or water inserted cWW Y-Y. \| cWH basepair with syn base \| cWW AG or water inserted cWW Y-Y. \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif
2	IL_37056.1	16	1-3 bulged nucleotides, same chain \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW
3	IL_67813.1	15	cWW AG or water inserted cWW Y-Y. \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif \| cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| cWW AG or UU \| cWH basepair with syn base \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif \| 16S h34 ILa : Part of larger motif
4	IL_71837.1	8	cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif \| cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| cWH basepair with syn base \| cWW AG or water inserted cWW Y-Y. \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif \| cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
5	IL_65554.1	8	cHS-cWS triple and Wobble. SSU Helix 44 (h44) IL1. \| Tandem sheared with inserted, unpaired purine. \| Leadzyme Motif. SSU Decoding site motif, extended. \| cWW-L-cWW-cWW \| Leadzyme Motif. LSU H101 IL2. SSU Decoding site. \| Tandem sheared with inserted, unpaired purine. \| cHS-cWS triple and Wobble. SSU Helix 44 (h44) IL1.
6	IL_55214.1	8	Leadzyme Motif. SSU Decoding site motif, extended. \| cWW-L-cWW-cWW \| Leadzyme Motif. LSU H101 IL2. SSU Decoding site.
7	IL_74856.1	8	LSU Helix 89 (H89) IL2
8	IL_64847.1	7	Double-sheared with two unpaired, stacked As. LSU Helix 68 IL4.
9	IL_16029.1	5	cWW AG or water inserted cWW Y-Y. \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif \| cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
10	IL_59864.1	5
11	IL_82133.1	5	SSU Decoding Site -- Human. Bulge-cSW-tHS \| Leadzyme Motif. SSU Decoding site motif, extended. \| cWW-L-cWW-cWW \| Leadzyme Motif. LSU H101 IL2. SSU Decoding site. \| Tandem sheared with inserted, unpaired purine. \| cHS-cWS triple and Wobble. SSU Helix 44 (h44) IL1.
12	IL_71229.1	5
13	IL_04397.1	5
14	IL_46960.1	5	16S h19 IL and 23S H41 IL \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW
15	IL_48183.1	5	tSH-tHW-bulge
16	IL_15123.1	4	Part of Helix 71 (H71) junction in 23S rRNA E.c. H.m. and Tetrahymena \| Part of H71 junction in 23S rRNA from T.th.
17	IL_56594.1	4	cWW AG or UU
18	IL_32261.1	4	LSU Helix 89 (H89) IL2
19	IL_08763.1	4	LSU H77 \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL
20	IL_55114.1	4	tHS tHH bulge with S-turn \| Double S-turn motif
21	IL_66654.1	4	Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif \| cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif \| cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| cWW AG or UU \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
22	IL_95908.1	3	LSU H77 \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW \| cWW-bulge-cWW \| 16S h19 IL and 23S H41 IL \| cWW-bulge-cWW
23	IL_89252.1	3
24	IL_37171.1	3	LSU H58 IL2 H.m.
25	IL_72641.1	3	cWW AG or UU \| cWH basepair with syn base \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75) \| 16S h34 ILa : Part of larger motif
26	IL_67024.1	2
27	IL_30534.1	2
28	IL_43545.1	2	Leadzyme Motif. SSU Decoding site motif, extended. \| cWW-L-cWW-cWW \| Leadzyme Motif. LSU H101 IL2. SSU Decoding site. \| Tandem sheared with inserted, unpaired purine. \| cHS-cWS triple and Wobble. SSU Helix 44 (h44) IL1.
29	IL_60613.1	2
30	IL_16977.1	2
31	IL_87064.1	2	tHS tHH bulge with S-turn
32	IL_05641.1	2
33	IL_90877.1	2
34	IL_25541.1	2	Triple Sheared with unpaired, inserted A
35	IL_39175.1	2
36	IL_92422.1	2
37	IL_12204.1	2
38	IL_92576.1	2
39	IL_26448.1	1
40	IL_41516.1	1
41	IL_96920.1	1	SSU Helix 12 (h12) IL
42	IL_03625.1	1
43	IL_16921.1	1
44	IL_45432.1	1
45	IL_86453.1	1	23S H73 ILa : Part of larger Motif \| Single sheared with bulged bases \| 23S H73 ILa : Part of larger Motif \| Single sheared with bulged bases \| Single sheared with bulged bases \| Single sheared (tHS) with bulged bases. LSU Helix 75 (H75)
46	IL_99937.1	1
47	IL_03808.1	1
48	IL_36006.1	1
49	IL_46151.1	1	Triple Sheared with unpaired, inserted A
50	IL_62296.1	1
51	IL_23302.1	1
52	IL_64213.1	1	SSU Helix 12 (h12) IL \| LSU Eukaryal Helix 96 (H96) IL1
53	IL_72293.1	1
54	IL_25420.1	1
55	IL_73656.1	1
56	IL_25771.1	1
57	IL_41027.1	1